| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2942 |
|---|
| Symbol | |
|---|
| ID | 5368690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3330678 |
|---|
| End bp | 3331592 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640805315 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_001341788 |
|---|
| Protein GI | 152996953 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.176096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.766616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATCAA TTTACGATTA TGTTCCTGCA GAGTTTAGAC AATTGGCTGT TGTCGGGGTG
ATTTTAGTCA TTACGGTAGT GCTGAATTGG GTTGCCCACG TTGCAGTTAA AAGGGCGTCG
TTGTCAAAAT TAGCGCGAGA TTCCGTAGAT ACTACTGTCC TTAATTTTGC GCAAAGATTA
ATAACCGTTG TTATTTATGG CACGGGCATT GGGGCATCCT TAACACATAT CCCTGAGTTA
AAAATTGTCG GGCACTCATT GCTGACTGGA GCTGGCATTC TAACCGTTGT GGGCGGGTTG
GCATCTCAGC AGGTTTTGGG AAATATTGTA AGCGGATTTA TGATTATTTT TTTTAGACCA
TTCCGTATCG GGGACAAAAT CACGCTATCA GGGAATTACA CAGGAGTCGT CGAAGACATT
ACTCTAAGAG AAACCATCAT AAGGGATTTC GAAAACAACC GTGTAATCAT TCCCAATTCA
CAAATAAGCA GCCAAGTAAT TGTTAATACA AACCACACTG ACAACCGCGT TTGTAAATTT
ATCGAAGTTG GTGTCGGCTA CTCATCCGAT CTTGATCTGG CAATGACAAT AATGACCGAA
GAGATAAGCG GACATCCTTT TTTAATAGAT CAACGCACAG AGGAGCAAAA ACGAGATGGC
GTTCCGGTTG TCGTCGTTCG CCTCACTAGC CTTGGTGATT CCTCCATTAC GCTAAAAGCT
TGGGCTTGGG CGGAAAATTC AGGTAACGGT TTTATTTTGC AGTGCGACTC GTATGTGAAT
ATAAAACGTC GATTCGACCA AGCAGGCATA GACATTCCAT TTCCTCAAAC AACGATTTCT
TTTGCGGAAA ATGCGTCGGT ACAGATCATG CGGAACAAAA CTCTCACCGA TGATGCCTCT
AAAGACGAAA CATAA
|
|---|
| Protein sequence | MISIYDYVPA EFRQLAVVGV ILVITVVLNW VAHVAVKRAS LSKLARDSVD TTVLNFAQRL
ITVVIYGTGI GASLTHIPEL KIVGHSLLTG AGILTVVGGL ASQQVLGNIV SGFMIIFFRP
FRIGDKITLS GNYTGVVEDI TLRETIIRDF ENNRVIIPNS QISSQVIVNT NHTDNRVCKF
IEVGVGYSSD LDLAMTIMTE EISGHPFLID QRTEEQKRDG VPVVVVRLTS LGDSSITLKA
WAWAENSGNG FILQCDSYVN IKRRFDQAGI DIPFPQTTIS FAENASVQIM RNKTLTDDAS
KDET
|
|---|
| |