| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2938 |
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| Symbol | |
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| ID | 5368798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 3327414 |
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| End bp | 3328481 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640805311 |
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| Product | 23S rRNA pseudouridine synthase F |
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| Protein accession | YP_001341784 |
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| Protein GI | 152996949 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.367273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACG CTTCATCTAC TCGTTTAAAT AAATACATCA GCGAAAGCGG TATCTGCTCT
CGAAGAGACG CTGACCGCTT TATTGAACAA GGCAATGTGT TCATCAATGG CAAGCGTGCT
TCGGTGGGCG ATCAAGTTGT TGCCGGTGAT ACGGTGCGAG TTAATGGGCA GATCATTGAG
CCGCAGGATG CGGATGACTT TGTTTTTATT GTGCTGAATA AGCCTGTTGG CATTGTGAGT
ACCACGGAAA GTTCTGAAAA AAATAATATT GTTGATTTCG TTAGCCATGG GGTGCGTATT
TTCCCAATTG GTCGTTTAGA CAAAGACTCC CAAGGTTTGA TTTTTTTGAC CAACAATGGC
GACCTAGTTA ATAAAGTACT GCGTGCTGGC AATAATCACG AGAAAGAATA TTTGGTGACG
GTTAATAAGC CGATCACGGA TGATTTTATT GCTGGTTTGG CCGGTGGTGT GCCTATCTTG
GGGACCATGA CGAAGAAATG CCCAGTGACG AAAGTGTCGC CTACAGTATT TAATATTACC
TTGGTGCAAG GTTTGAATCG TCAAATTCGC CGTATGTGTG AGTATTTCGG TTATGAGGTC
GTTAAATTAG AGCGCACACG AATTATGAAC GTGAGCCTAA AAGGCATTCC TGTAGGGGAG
TGGCGAGATT TAACACCCAA AGAATTGTCT GTGTTGCTGA AGTCTATTGA AGACTCGTCT
TCAGAAGCCA GTGCGCCAGC GAAGAAGTCT CGCAATGCGC CGCGAAAAAA TACTCGTACT
GACGGCTCTT CAAAGCCGAA AGTATCCTCA AAGCCTAAAG CGCCGTCTAA ACCAATGGGC
GCAGCAAAGG GGAATACTAA ACACCCTAAA GATGACGCTA GAAAACCAGC AGGTTCTAAG
AGTAAAGATA GACGTCCTTT TGGTGATAGT AAAAAGCCTG CTGGAAACGG TGCTGGTAAA
CGACCAACAG GTAAACCGGG GGGATCTCCC AAGGGTAATG GCAAGCCGAC TACAAATGGT
AAACGTCCGT CAGCTGGTAG AGGCTCGCAG AGGTCTTCGC GCCCATAG
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| Protein sequence | MFNASSTRLN KYISESGICS RRDADRFIEQ GNVFINGKRA SVGDQVVAGD TVRVNGQIIE
PQDADDFVFI VLNKPVGIVS TTESSEKNNI VDFVSHGVRI FPIGRLDKDS QGLIFLTNNG
DLVNKVLRAG NNHEKEYLVT VNKPITDDFI AGLAGGVPIL GTMTKKCPVT KVSPTVFNIT
LVQGLNRQIR RMCEYFGYEV VKLERTRIMN VSLKGIPVGE WRDLTPKELS VLLKSIEDSS
SEASAPAKKS RNAPRKNTRT DGSSKPKVSS KPKAPSKPMG AAKGNTKHPK DDARKPAGSK
SKDRRPFGDS KKPAGNGAGK RPTGKPGGSP KGNGKPTTNG KRPSAGRGSQ RSSRP
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