| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2842 |
|---|
| Symbol | |
|---|
| ID | 5366656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3219152 |
|---|
| End bp | 3219796 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640805216 |
|---|
| Product | lipoate-protein ligase B |
|---|
| Protein accession | YP_001341689 |
|---|
| Protein GI | 152996854 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0321] Lipoate-protein ligase B |
|---|
| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.117951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000142913 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTG ATTTAATTTG CCGTGATTTA GGTGTTGTTG ATTATGCTGA AACATGGGAA
AGGATGAAGC AATTTACTCA AATTCGTTCA AAAGACGATG CTGATGAGAT TTGGCTGTTA
GAGCATCCTT CCTTGTTTAC ACAAGGTCAA GCCGGTAAAG AAGAGCATCT TTTGGCTCCG
GGTGATATTC CTGTTATTCA GGTCGACCGT GGTGGTCAGG TCACGTATCA TGGGCCGGGT
CAACTGGTTG CTTATGTCAT GGTTGATTTA AAACGTCTTG GGATAGGCGT TCGTGATTTG
GTTAGTGTGT TAGAGAACTC TGTGGTGCGC GCTTTGGCGC TGAACGCTAT AGAGGCCTAC
CCAAAGCCAG ACGCACCAGG CGTTTATGTG GATGAACAAA AAATTGCGTC ACTAGGATTA
CGTGTACGCA GAGGTTGTTC ATTTCATGGA CTTGCCTTAA ATGTTGATAT GGATCTCACC
CCATTTAATC GTATTAACCC ATGTGGCTAT CAAGGCTTAC AAATGGTTGA TATGAAGCGT
CTAAATAAAG GCGTTATTTT ATCGAATGTA AAGGCTCAGC TAGCGAATCA GCTGGCTGAG
CAACTCGGAT ACAATTATCC GGCTATCCAA CAAGGGTGGA AATAG
|
|---|
| Protein sequence | MELDLICRDL GVVDYAETWE RMKQFTQIRS KDDADEIWLL EHPSLFTQGQ AGKEEHLLAP
GDIPVIQVDR GGQVTYHGPG QLVAYVMVDL KRLGIGVRDL VSVLENSVVR ALALNAIEAY
PKPDAPGVYV DEQKIASLGL RVRRGCSFHG LALNVDMDLT PFNRINPCGY QGLQMVDMKR
LNKGVILSNV KAQLANQLAE QLGYNYPAIQ QGWK
|
|---|
| |