Gene Mmwyl1_2826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_2826 
Symbol 
ID5369215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp3203423 
End bp3205372 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content40% 
IMG OID640805200 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_001341673 
Protein GI152996838 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.525997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.15588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGT TCCGCCAATT AATGATGACG ATTATTGCCA TATTCTCATT GATGCTCGCC 
GTAGTGATGG TTATCAATTT TAATACCACC AAGGGCTATT TAATCGGGCA ATTAGAATCA
ACGACCCAAG ACTCAGCCAC CTCTTTGAGT ATGTCTGTCT CCGACTTTAT GGCGATGGAA
GATTATGCTT CTGTAGAAAG TAGCATTAAT GCTGTTTTTG ATAGCGGCTA TTTTTCGGAA
GTTCGTATTC ATGTTTATGA TACAGATAAA AATATCACCC GTTCCAATGA AACTAAAATA
GACGGTGTTC CTAATTGGTT TATTCAGCTA ATTGATTTCA AGGTGCCAGT GGCTAAAGCC
GTTATTTCAA ATGGTTGGAG TGAGTTAGGA CAGGTTTATA TTACAGGTAG TGCAGGGTAT
GGCTACAATC AGCTTTGGCT TGCTTCACGG GATTTATTAG TGTCATTTTT TGTGATTGGT
GCAATCACTC TGGTTATTGG CAGTTTTGCG TTACGTTATT TATTTCGACC TTTGGCTGAG
CTTGAAAAAC AAGCGGAAGC GATTCAGCAA CGCCGTTTTA TTAAAACCAT TGTAGTGCCT
AAAACACGAG AGCTAAAGTC TGTTGTGTTG TCTATGAACC GAATGGCAGA AAAACTAGAA
AAAGAGTTCG CGTCGGAAGT CGAGACGGCT CAATGGCTGC AAGCCAAAGC GTTTAAAGAC
CCAGTTAGTG GATTAGGTAA TCGACATTTT TTTGAAAGCC AGATGAAATC ACATTTTGCT
GAAAGAGAGC GCGGTATCGA TGGGCTAGTT CTGATTAGTT TGGCGGATTT GGGTAAGTTA
AATAATGAGC GTGGTTATGA ATCTGCGGAT ATGTTTATCC AATCTGCCGC TGATATTTTA
ACTAAAAAAG TATCGACGCT GTCTTCTTTT TCTACTTTAG CCCGTTTATC TGGGGCGGAC
TTTGTTTTGC TTATTCCTAA TTTTGATCAC AGTCAGCTTA CTAAAGTGGT CGATGATATT
ATGTCAGAGT TAATGGAATT GAATACAGCA GGCATTAGTT ATTCTGCTGC GGTGGCTAAC
ATTGGTGCAG TGACCATTGA TGGATCGGTA GAGCGTTCAA GTGCCATGTC TCAAGCTGAT
GCTGCTCTGC GTGAGGCGAA ACGAGAGGGT AGCAATTCGA GTAAAGTGTT TGATCTTAAT
ATGGGCCAAG ATATGGCCAT TAGTAAAACG GCTTGGAAAG AAATATTAGA ATCAGCCATA
CGGCATAAAT CTTTCAAACT TAAAAAACAA AAAATTACAA CTTTGGATGA AACGCCAACT
ATTTTGCATG AAGAAGTCTT TATGGGCTTG GAACATGCAG GGAAAGAGTA TCATGCGGGG
TATTTTATTG GTTTGGCTGA ACTGTTTGAT TTAGGTAGTC AAATAGATCA AGTCATTATT
GGACGAGTGA TCGAATACAT TAAATCGAGG CAGCTTACAG TTCCATTAAC TGTAAACTTG
TCAGCGTCTT CTTATGCTAA GCCTGCTTTT ATTACATGGT TAGACAAAAC ATTGAGCAAC
CTTAATGTAG ACGTAAAAAG TAAATTGATG TTTGAAATTT CGGAGCAGAG TGTGTTGATT
GAAGAGACAC AGGCGAATGA GTTGGCTCAG ATGCTAAAAA CACAACGAGT GCAATTTGGC
ATTGATAATG TGGGTAAACA GTTCTCCGCC TTTCAATATC TACAAACTTT GATGCCGGAT
TACGTTAAGG TGGATTCTTC TTATACCCGA ATGGCAGCAG GTAAAGAGTC TGAATCTTTC
TTCATGCACA CCTTGTGTAA GATGTTTGGT AGCTTAAATA TTGAGGTGAT TGCGACGGGA
GTTGAGAGTG AAAAACAATG GATAGCATTG AAACGCTTTG ATGTATCCGG TGGCCAAGGA
TTTCTAATCG GTCGCGCACA GGATATGTAG
 
Protein sequence
MTLFRQLMMT IIAIFSLMLA VVMVINFNTT KGYLIGQLES TTQDSATSLS MSVSDFMAME 
DYASVESSIN AVFDSGYFSE VRIHVYDTDK NITRSNETKI DGVPNWFIQL IDFKVPVAKA
VISNGWSELG QVYITGSAGY GYNQLWLASR DLLVSFFVIG AITLVIGSFA LRYLFRPLAE
LEKQAEAIQQ RRFIKTIVVP KTRELKSVVL SMNRMAEKLE KEFASEVETA QWLQAKAFKD
PVSGLGNRHF FESQMKSHFA ERERGIDGLV LISLADLGKL NNERGYESAD MFIQSAADIL
TKKVSTLSSF STLARLSGAD FVLLIPNFDH SQLTKVVDDI MSELMELNTA GISYSAAVAN
IGAVTIDGSV ERSSAMSQAD AALREAKREG SNSSKVFDLN MGQDMAISKT AWKEILESAI
RHKSFKLKKQ KITTLDETPT ILHEEVFMGL EHAGKEYHAG YFIGLAELFD LGSQIDQVII
GRVIEYIKSR QLTVPLTVNL SASSYAKPAF ITWLDKTLSN LNVDVKSKLM FEISEQSVLI
EETQANELAQ MLKTQRVQFG IDNVGKQFSA FQYLQTLMPD YVKVDSSYTR MAAGKESESF
FMHTLCKMFG SLNIEVIATG VESEKQWIAL KRFDVSGGQG FLIGRAQDM