Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2826 |
Symbol | |
ID | 5369215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3203423 |
End bp | 3205372 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640805200 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001341673 |
Protein GI | 152996838 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.525997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.15588 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGT TCCGCCAATT AATGATGACG ATTATTGCCA TATTCTCATT GATGCTCGCC GTAGTGATGG TTATCAATTT TAATACCACC AAGGGCTATT TAATCGGGCA ATTAGAATCA ACGACCCAAG ACTCAGCCAC CTCTTTGAGT ATGTCTGTCT CCGACTTTAT GGCGATGGAA GATTATGCTT CTGTAGAAAG TAGCATTAAT GCTGTTTTTG ATAGCGGCTA TTTTTCGGAA GTTCGTATTC ATGTTTATGA TACAGATAAA AATATCACCC GTTCCAATGA AACTAAAATA GACGGTGTTC CTAATTGGTT TATTCAGCTA ATTGATTTCA AGGTGCCAGT GGCTAAAGCC GTTATTTCAA ATGGTTGGAG TGAGTTAGGA CAGGTTTATA TTACAGGTAG TGCAGGGTAT GGCTACAATC AGCTTTGGCT TGCTTCACGG GATTTATTAG TGTCATTTTT TGTGATTGGT GCAATCACTC TGGTTATTGG CAGTTTTGCG TTACGTTATT TATTTCGACC TTTGGCTGAG CTTGAAAAAC AAGCGGAAGC GATTCAGCAA CGCCGTTTTA TTAAAACCAT TGTAGTGCCT AAAACACGAG AGCTAAAGTC TGTTGTGTTG TCTATGAACC GAATGGCAGA AAAACTAGAA AAAGAGTTCG CGTCGGAAGT CGAGACGGCT CAATGGCTGC AAGCCAAAGC GTTTAAAGAC CCAGTTAGTG GATTAGGTAA TCGACATTTT TTTGAAAGCC AGATGAAATC ACATTTTGCT GAAAGAGAGC GCGGTATCGA TGGGCTAGTT CTGATTAGTT TGGCGGATTT GGGTAAGTTA AATAATGAGC GTGGTTATGA ATCTGCGGAT ATGTTTATCC AATCTGCCGC TGATATTTTA ACTAAAAAAG TATCGACGCT GTCTTCTTTT TCTACTTTAG CCCGTTTATC TGGGGCGGAC TTTGTTTTGC TTATTCCTAA TTTTGATCAC AGTCAGCTTA CTAAAGTGGT CGATGATATT ATGTCAGAGT TAATGGAATT GAATACAGCA GGCATTAGTT ATTCTGCTGC GGTGGCTAAC ATTGGTGCAG TGACCATTGA TGGATCGGTA GAGCGTTCAA GTGCCATGTC TCAAGCTGAT GCTGCTCTGC GTGAGGCGAA ACGAGAGGGT AGCAATTCGA GTAAAGTGTT TGATCTTAAT ATGGGCCAAG ATATGGCCAT TAGTAAAACG GCTTGGAAAG AAATATTAGA ATCAGCCATA CGGCATAAAT CTTTCAAACT TAAAAAACAA AAAATTACAA CTTTGGATGA AACGCCAACT ATTTTGCATG AAGAAGTCTT TATGGGCTTG GAACATGCAG GGAAAGAGTA TCATGCGGGG TATTTTATTG GTTTGGCTGA ACTGTTTGAT TTAGGTAGTC AAATAGATCA AGTCATTATT GGACGAGTGA TCGAATACAT TAAATCGAGG CAGCTTACAG TTCCATTAAC TGTAAACTTG TCAGCGTCTT CTTATGCTAA GCCTGCTTTT ATTACATGGT TAGACAAAAC ATTGAGCAAC CTTAATGTAG ACGTAAAAAG TAAATTGATG TTTGAAATTT CGGAGCAGAG TGTGTTGATT GAAGAGACAC AGGCGAATGA GTTGGCTCAG ATGCTAAAAA CACAACGAGT GCAATTTGGC ATTGATAATG TGGGTAAACA GTTCTCCGCC TTTCAATATC TACAAACTTT GATGCCGGAT TACGTTAAGG TGGATTCTTC TTATACCCGA ATGGCAGCAG GTAAAGAGTC TGAATCTTTC TTCATGCACA CCTTGTGTAA GATGTTTGGT AGCTTAAATA TTGAGGTGAT TGCGACGGGA GTTGAGAGTG AAAAACAATG GATAGCATTG AAACGCTTTG ATGTATCCGG TGGCCAAGGA TTTCTAATCG GTCGCGCACA GGATATGTAG
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Protein sequence | MTLFRQLMMT IIAIFSLMLA VVMVINFNTT KGYLIGQLES TTQDSATSLS MSVSDFMAME DYASVESSIN AVFDSGYFSE VRIHVYDTDK NITRSNETKI DGVPNWFIQL IDFKVPVAKA VISNGWSELG QVYITGSAGY GYNQLWLASR DLLVSFFVIG AITLVIGSFA LRYLFRPLAE LEKQAEAIQQ RRFIKTIVVP KTRELKSVVL SMNRMAEKLE KEFASEVETA QWLQAKAFKD PVSGLGNRHF FESQMKSHFA ERERGIDGLV LISLADLGKL NNERGYESAD MFIQSAADIL TKKVSTLSSF STLARLSGAD FVLLIPNFDH SQLTKVVDDI MSELMELNTA GISYSAAVAN IGAVTIDGSV ERSSAMSQAD AALREAKREG SNSSKVFDLN MGQDMAISKT AWKEILESAI RHKSFKLKKQ KITTLDETPT ILHEEVFMGL EHAGKEYHAG YFIGLAELFD LGSQIDQVII GRVIEYIKSR QLTVPLTVNL SASSYAKPAF ITWLDKTLSN LNVDVKSKLM FEISEQSVLI EETQANELAQ MLKTQRVQFG IDNVGKQFSA FQYLQTLMPD YVKVDSSYTR MAAGKESESF FMHTLCKMFG SLNIEVIATG VESEKQWIAL KRFDVSGGQG FLIGRAQDM
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