| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2823 |
|---|
| Symbol | |
|---|
| ID | 5367031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3199245 |
|---|
| End bp | 3200576 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640805197 |
|---|
| Product | HlyD family type I secretion membrane fusion protein |
|---|
| Protein accession | YP_001341670 |
|---|
| Protein GI | 152996835 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.51941 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATA AAAATTCGAT TTCACAAGAT GATTTAGAGT ATCTAACGGA CCGAAATGCG
GCCTTGATGT TGAAAACACC ACGTGGCGGT AGAATTATCC TTTGGGTGAT TTTTATTTTC
GTGGCAGCGG CATTGGTGTG GGCTAATTAT ACGGCTTTAG ATGAAGTTAC TGTGGGCGAA
GGGAAAGTCA TTCCTTCTAG CCAAGTCCAG CAGATTCAAA ACCTTGAAGG TGGTATTTTA
AAAGAAATTA ATGCCAAAGT AGGTCAAGTA GTCGATAGTG GGCAAGTGTT GATGACGATA
GAAAATACTG AAGCTTTGTC ATCATTGCGT GAACAGCAAG CCGAATCGAT TAATTTAAAA
GTTCGAGCGA CTCGATTACA GGCTGAATCT TACGGTCTGG AGCCTAAATT TGATCCGGAA
ATCATGAAAG ATTATCCGCT GGTTGTAAAG CGTGAACTTG ATTTATATAA CAACAGATTA
GAGTCTTTAC GGACTAACCA GGTTGGCTTT CAGCAGCAGA TTGAGCAAAA GAAACAAGAA
ATAGTTGAGT TACAGGCAAA ACTAGAAAAC TTAAAACAAA GTTATGCCTT TTCTAAGGAA
GAGTTGGCAT TAACTCGACC TGCGTTTGAG CAAGGAGCTG TGTCTAGGGT TGAGTTATTG
CAGCTCGAAC GCCAAGTCAA TCAGTTGCAA GGGGATTTGG AAGCAACTCA GCTAGCGATT
CCTCGGGCGC GTTCAGCGCT GAAAGAAGCG CAAAGTAAGC TATCCGAAGG TGAAGCGAAA
TTTAGGGCGG ATGCTCAAGA AGACCTAACT GGAGTAAAAA GTAAATTAGA TCAGTTACGC
GAAAGCAATG TGTCTCTTGA AGATAAAGTA TCGAGAACAC AGGTTAGATC ACCAGTAAAA
GGTATTGTGA AACAGATTCA AATTAATACA GTTGGTGGTG TTATCAAGCC CGGTATGAAC
TTACTTGAGA TTGTTCCAAT TGAAGATTCT CTGTTAATCG AAGCAAAAGT ACGTCCTGAA
AATATTGGTT TTATTAAGCC TGATTTGAGT GCAGTGGTGA AATTATCAGC CTACGATTTT
GCAATTTTTG GTGGTTTGCA TGGTGTGGTG GAAAACATTA GTGCGGATAC TATTCTCGAT
GAGGAAGGAA ACAGCTTCTA TCTTGTTCGG GTAAGAACGG ATAAAAACTA TTTAGGTACT
AAAAATGCGC CATTGCCTAT TATACCTGGT ATGCAGGCAA CAGTAGATAT TATTACAGGT
AAGAAAACTT TGTTAGATTA TTTGCTAAAA CCTATTTTAA AGGCAAAGCA AAATGCGCTT
CGTGAGCGGT AA
|
|---|
| Protein sequence | MSNKNSISQD DLEYLTDRNA ALMLKTPRGG RIILWVIFIF VAAALVWANY TALDEVTVGE
GKVIPSSQVQ QIQNLEGGIL KEINAKVGQV VDSGQVLMTI ENTEALSSLR EQQAESINLK
VRATRLQAES YGLEPKFDPE IMKDYPLVVK RELDLYNNRL ESLRTNQVGF QQQIEQKKQE
IVELQAKLEN LKQSYAFSKE ELALTRPAFE QGAVSRVELL QLERQVNQLQ GDLEATQLAI
PRARSALKEA QSKLSEGEAK FRADAQEDLT GVKSKLDQLR ESNVSLEDKV SRTQVRSPVK
GIVKQIQINT VGGVIKPGMN LLEIVPIEDS LLIEAKVRPE NIGFIKPDLS AVVKLSAYDF
AIFGGLHGVV ENISADTILD EEGNSFYLVR VRTDKNYLGT KNAPLPIIPG MQATVDIITG
KKTLLDYLLK PILKAKQNAL RER
|
|---|
| |