| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2802 |
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| Symbol | sdhA |
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| ID | 5365982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 3175683 |
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| End bp | 3177455 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640805176 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001341649 |
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| Protein GI | 152996814 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.35465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.79012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATA TTCGTACTAT TTCTTTTGAT GCCATTGTTA TCGGTGGTGG CGGCGCAGGT
ATGCGTGCAG CACTTCAGTT AACTGAATCT GGTTTGAATA CCGCGTGTGT TACCAAAGTA
TTCCCGACTC GTTCTCACAC TGTGTCTGCG CAAGGTGGTA TTACCTGTGC GATCGCAAGT
GATGATCCAA ATGATGATTG GCGCTGGCAT ATGTATGACA CTGTAAAAGG GTCAGATTAC
ATTGGCGACC AAGATGCTAT CGAATACATG TGTTCCGTAG GTCCTCAGGC TGTATTTGAG
CTTGAGCACA TGGGGCTACC GTTTTCTCGT ACTGAGCAAG GTCGTATTTA TCAGCGTCCT
TTTGGTGGTC AGTCTAAAGA TTTTGGTAAA GGCGGTCAGG CTGCTCGTAC TTGTGCGGCT
GCTGACCGTA CTGGTCATGC CTTGTTGCAT ACGCTTTATC AAGGCAACCT AAAAGGCGGT
ACTACATTCT TTAATGAGTG GTATGCGACA GATCTTGTTA AAAATAACGA AGATGCTGTT
GTTGGTGTTA TTGCGATTTG TATCGAAACT GGCGAAACAG TTTACTTGAA AGCAAAAGCA
ACTGTTATTG CAACTGGTGG TGCTGGTCGT ATTTATCAGT CTACTACTAA TGCTCATATC
AATACTGGTG ACGGTGTGGG TATGGCGCTT CGTGCTGGTT TCCCAATGCA AGATATGGAA
ATGTGGCAGT TCCACCCAAC CGGTATCTAT GGTGCTGGTA CTCTAGTTAC TGAAGGTTGC
CGTGGTGAAG GTGGTTACCT AATCAATAAA GACGGCGAGC GTTTCATGGA GCGTTATGCG
CCAAACGCTA AAGACCTTGC TGGTCGTGAC GTTGTTGCAC GTTCAATGAT TCTTGAAATC
CTAGAAGGTC GTGGATGTGG TCCAGATGGG GATCACGTAT TGCTAAAATT AGATCACTTG
GGTGAAGAGA CCTTGAATAA GCGTCTTCCA GGTATTCTTG AGCTTTCTCG TACTTTTGCT
CACGTTGATC CAGTTAAAGA GCCAATTCCA GTTATCCCTA CTTGTCATTA TATGATGGGG
GGTATTCCAA CAAATATCGG CGGGCAAGCA ATTAAAGTTA ACGAAGCGGG CGAAGATACC
ATTATTGATG GTCTTTACGC GTGTGGAGAG GCGGCTTGTG TATCTGTGCA CGGTGCAAAC
CGTCTTGGTG GTAACTCGTT GCTTGATTTG GTTGTATTTG GGCGCGCTGT TGGTATTCAA
GTTAAAAAAT CTTTGGATGA AGGTTTTGAA TCGCTTGATG CTGACGATAC AAATGTTGAA
AAAGCGTTGG CTCGTCTAAA TCGCTTAAAT AGTTCGACTG GCGGTGAAAG TGTTGCTGCA
GTTCGTGCTG ACCTTCAGCG TGTAATGCAA CTATATTTCG GTGTGTTCCG TGATGGCGAA
GCAATGCAGA AAGGCTTGGA GCAGTTAAAA GAGATTCGTA CTCGAGTTGA AAATCTTCAC
CTTGAAGATA AGAGCCAGGC ATTCAATACA GCTCGTATTG AAGCTCTTGA GCTTGAGAAC
TTATTAGAGG TTGCTGAAGC GACTGCCATT CCTGCGGAAT TCCGTAAGGA AAGTCGTGGT
GCTCATGCGC GTAATGACTT TACAGAGCGT GATGATGAGA ACTGGTTGAA GCATTCTTTA
TTCCATCCAG TAGGTAAAGC GGTAACTAAG CGTGATGTAA ACTTTGCGCC GAAAACTATG
GAAGCTTTCC CACCTAAGGC TCGTTCATAT TAA
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| Protein sequence | MANIRTISFD AIVIGGGGAG MRAALQLTES GLNTACVTKV FPTRSHTVSA QGGITCAIAS
DDPNDDWRWH MYDTVKGSDY IGDQDAIEYM CSVGPQAVFE LEHMGLPFSR TEQGRIYQRP
FGGQSKDFGK GGQAARTCAA ADRTGHALLH TLYQGNLKGG TTFFNEWYAT DLVKNNEDAV
VGVIAICIET GETVYLKAKA TVIATGGAGR IYQSTTNAHI NTGDGVGMAL RAGFPMQDME
MWQFHPTGIY GAGTLVTEGC RGEGGYLINK DGERFMERYA PNAKDLAGRD VVARSMILEI
LEGRGCGPDG DHVLLKLDHL GEETLNKRLP GILELSRTFA HVDPVKEPIP VIPTCHYMMG
GIPTNIGGQA IKVNEAGEDT IIDGLYACGE AACVSVHGAN RLGGNSLLDL VVFGRAVGIQ
VKKSLDEGFE SLDADDTNVE KALARLNRLN SSTGGESVAA VRADLQRVMQ LYFGVFRDGE
AMQKGLEQLK EIRTRVENLH LEDKSQAFNT ARIEALELEN LLEVAEATAI PAEFRKESRG
AHARNDFTER DDENWLKHSL FHPVGKAVTK RDVNFAPKTM EAFPPKARSY
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