Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2801 |
Symbol | sdhB |
ID | 5365828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3174966 |
End bp | 3175670 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640805175 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_001341648 |
Protein GI | 152996813 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.261563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.502988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGTTA GTATCTATCG CTACAATCCT GAGAAGGACG ACGCTCCTTA CATGCAGGAT TATGAAATTG AGTTGCCAGC AGGTAAAGAC CTAATGGTGC TTGATGTTTT GAACTTGTTG AAGGCTCAAG ATCCTAGTAT TTCTTACCGT CGCTCATGCC GTGAAGGTGT GTGTGGCTCA GACGGTATGA ATATGTCAGG TAAAAATGGT CTAGCTTGTA TCACGCCAGT TTCTGAAGCA GTTAAAAAAG GTAAGTTGGT ATTACGTCCA CTTCCTGGAT TGCCTGTTGT TCGTGACCTT GTTGTTGATA TGGGGCAGTT CTACAAGCAG TATGAGAAGA TTCGTCCATA CTTGCTTAAT GATACTCCAG CACCTGCAAT TGAGCGTTTA CAAAGCCCTG AGGAGCGTGA AAAGCTTGAT GGTCTTTATG AGTGTATCTT GTGTGCGTGT TGCTCAACTG CTTGTCCATC ATTCTGGTGG AATCCTGATA AGTTCGTAGG ACCATCAGGT TTGCTACAGG CATATCGCTT CTTGGCAGAT AGCCGTGATA CAGCAACTCA AGAACGTCTT AGCGATTTGG ATGACCCATT CAGTGTTTTC CGTTGTCACG GTATCATGAA CTGTGTCAAC GTTTGTCCAA AAGGGTTAAA TCCAACTAAG GCAATCGGTA ATATTCGTAC TATGCTATTG CAGAGAGCGA CCTGA
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Protein sequence | MLVSIYRYNP EKDDAPYMQD YEIELPAGKD LMVLDVLNLL KAQDPSISYR RSCREGVCGS DGMNMSGKNG LACITPVSEA VKKGKLVLRP LPGLPVVRDL VVDMGQFYKQ YEKIRPYLLN DTPAPAIERL QSPEEREKLD GLYECILCAC CSTACPSFWW NPDKFVGPSG LLQAYRFLAD SRDTATQERL SDLDDPFSVF RCHGIMNCVN VCPKGLNPTK AIGNIRTMLL QRAT
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