| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2788 |
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| Symbol | |
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| ID | 5366961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 3158242 |
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| End bp | 3159960 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640805163 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001341636 |
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| Protein GI | 152996801 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000414241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTAT TAGATACCAA TGAAGGTCAT GCCCTAAAAC TATTAATTGT CGACGATGAT
GATGTTGATC GCGAACGTTT GCGTAGAATG CTTTCTAAAT CCGATATAGA AACCAGCATT
TCAGAAGCCT CTACCATTGA AGACTCTATG GATTTCCTCA GTAACGACGA TTACGACTGC
GTCATCGTTG ATTATCGTTT GGGGCTAAAC TCTGGGCTCA CTCTACTAAA TAGCATACGC
ACAACGATGG ACCGGCACTG TGCTGTAATC ATGGTCACAG GTTTAGGAGA TGAAGAAGTA
GCCGCTGAAG CAATGCGGCT CGGCGCCAGT GATTACCTAC TAAAAAGCCA ATTACAAAGC
CCTCAACTCA TACGAGCTAT TATTAGCTCT ATCCATCGGG CTGAGTTAGA AAAAAAACTC
CATGACATGG CCCATTATGA CAACTTAACA GGCCTAGCAA GTCGACCTTT ACTACTTGAA
AATTTACAGC AAATTATAAT AAATAAAGAA GCCGCGGCTG TCGCATTTCT TGATTTAGAT
AACTTCAAAC CAGTAAACGA TAATTACGGC CATGATACGG GTGATTATGT ACTCGTCACC
ATTGCCAACC GACTAAAACA GATACTCCGT AAAAGCGATA CACTTGCTCG TATTGGCGGT
GATGAATTTG TTTTATTATT AAGAGATGTT TCTTGTCGAG ATGAGTGTGA TGGCTTTCTA
AATCGCCTTA TTGAACTAGT CAACACTCCC ATTGCATTGA CAGAATTTGA ATGTCAGGTT
CAAGTATCAG CAAGTATCGG AGTCGCTCTG GTTTCTAATG ACAGTTTAGA AGCAGACACT
ATTTTGCGCA GGGCAGATCA AACCATGTAC CAAGCAAAAA ACATGGGAAG AAATAACATC
ATATTTTTTG ATCCTGAAGA GGAGCGCCGC CAATACGCCC GACGCGCTAT GTTACAAGCA
GCAGAACGAG GTATTAAACT CGATGAATTC GAGCTTTACT ATCAACCTCA AGTCGACATG
CAGGAACATC AACTAATTGG TGTAGAAGCA CTTATTCGCT GGAACCATCC TACAATGGGA
TTTCTTTACC CTGGCGATTT CACTGAAGTA CTAGAGCATC CTAATACAGG AGTTTTAATT
GGTGAGTGGG TGTTACAAGA AGCACTACGC CAGCACAGTA TTTGGCAAAA AAATGATTTA
GTCATTAGCG TCAATATTGC ACCAGCTCAT CTTCTGAGCA AAAATTTTGT ACACCGACTA
GAGCAATTAC TCAAAAGCAT CCCTAACTTC AACCCAAACT TACTGGAAAT TGAAATACTA
GAGACCGTTT CAATTTCCGA TATTCTCAAT GCTGTTGAGG TTGTGAAAGC GTGTTGTAAA
TTAGGTATTC ATGTTGCGCT AGACGACTTT GGCACAGGAT ATTCATCTCT TAATTATTTG
AAGCAGCTTC CACTAAACAC CTTAAAAATT GATAGAAGTT TTATTCAAAA CATTTTATCT
GATCCTGAAG ATCGCGCTAT CGTCGCGTGC ATTGTCGCGC TAAGTAAAGC CTTCAACTAC
AAGCTCATTG CTGAAGGCGT TGAATCACTA GAACATGAAC AAGCACTTAT TGAGATAGGC
TGCCTATGCG GGCAAGGGTA CTTTATTGCC AAACCAATGA CCGCTGATAA CATGACAGCT
TGGATTCGAT ACTATAACCA AAAACACAAC ATCCATTAG
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| Protein sequence | MEVLDTNEGH ALKLLIVDDD DVDRERLRRM LSKSDIETSI SEASTIEDSM DFLSNDDYDC
VIVDYRLGLN SGLTLLNSIR TTMDRHCAVI MVTGLGDEEV AAEAMRLGAS DYLLKSQLQS
PQLIRAIISS IHRAELEKKL HDMAHYDNLT GLASRPLLLE NLQQIIINKE AAAVAFLDLD
NFKPVNDNYG HDTGDYVLVT IANRLKQILR KSDTLARIGG DEFVLLLRDV SCRDECDGFL
NRLIELVNTP IALTEFECQV QVSASIGVAL VSNDSLEADT ILRRADQTMY QAKNMGRNNI
IFFDPEEERR QYARRAMLQA AERGIKLDEF ELYYQPQVDM QEHQLIGVEA LIRWNHPTMG
FLYPGDFTEV LEHPNTGVLI GEWVLQEALR QHSIWQKNDL VISVNIAPAH LLSKNFVHRL
EQLLKSIPNF NPNLLEIEIL ETVSISDILN AVEVVKACCK LGIHVALDDF GTGYSSLNYL
KQLPLNTLKI DRSFIQNILS DPEDRAIVAC IVALSKAFNY KLIAEGVESL EHEQALIEIG
CLCGQGYFIA KPMTADNMTA WIRYYNQKHN IH
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