| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2783 |
|---|
| Symbol | |
|---|
| ID | 5367783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3153516 |
|---|
| End bp | 3153986 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640805158 |
|---|
| Product | tripartite ATP-independent periplasmic transporter DctQ |
|---|
| Protein accession | YP_001341631 |
|---|
| Protein GI | 152996796 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00888275 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAT TTATTCATGT GGTAGACCGC GTCTTATCAA CGGTTTGTAT CGTTTTGATG
GTGTCTCTCG TTGTTTGTGT GGTCTGGCAA GTGTTCTCTC GTTATGTATT GGGTGCACCT
AGCACGTCGA CGGATGAATT GGCTCGATTT CTTTTTATTT GGGTTGGTTT ACTCGGTGCT
GCATTTACTT TAGGGAAGAA AAAACATTTG GCGATGGATT TCTTATCGCA AACATTAGAA
GGGCGAAAAC AAGTCTTTCT GCAAATACTA ATTACCTCAA TCGGTTTGTT TTTTGCTGTT
GTGATTATGC TGTTTGGCGG CGGTTCATTA GTGATGAAAA CACTCAGTAA TGGGCAGGTT
TCTCCGGTTT TGGGGCTTGA AATGGGCTGG GTATATTCAG CTATCCCGAT AAGCGGTGCT
TGCATGATTC TTTATTTATT ACGAGATCTT TTTGCTCCAA CTCAAGATTA A
|
|---|
| Protein sequence | MAKFIHVVDR VLSTVCIVLM VSLVVCVVWQ VFSRYVLGAP STSTDELARF LFIWVGLLGA
AFTLGKKKHL AMDFLSQTLE GRKQVFLQIL ITSIGLFFAV VIMLFGGGSL VMKTLSNGQV
SPVLGLEMGW VYSAIPISGA CMILYLLRDL FAPTQD
|
|---|
| |