| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2733 |
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| Symbol | |
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| ID | 5366427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 3090520 |
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| End bp | 3093417 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640805108 |
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| Product | putative periplasmic ligand-binding sensor protein |
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| Protein accession | YP_001341581 |
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| Protein GI | 152996746 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTA TCTATTCGCA TAGAACAACG CCATTGTGGT TAGGAATTAT GTTGTTATGC
GCTTTAAATG TGGCTCATGC GAACACCTCA ACTCCTCTTT CAGATTATTT CAAAGACACT
TGGTCTACTC ATGAAGGCCT TCCACACAAC AGCATTAATG CCATCGCGCA AACTTCTGAT
GGTTATATAT GGTTTGCAAC TTGGGAAGGT GTTGCCCGTT ACAATGGTCG TGATTTTCGT
TTTTATGAAC GCTCGGATAA AACGGGGATT TTAGATTCTG GCATCCGGAC TCTTGTATCA
GATGCTAATA ATGGTTTGTG GATTGCGGGA GTAAGAGGCG GTATTACCTA TCGCCAAGGT
AATCAGTGGC AGCCACAATT TGCTGCGGCA AGCATGGTAA ATAACGTACT CAAAGACAGT
TCCGGCGGCC TTTGGATAGC CGTTGAAGGG TTGGGCGTAT TTCATCGGCC AAAGCCACAT
GTTGAAAATG GTGCCATTGA AGAAGTTTGG GTATTACAGA ACATTAGTGC TTACCGCTTA
CTTGAAGACA GTAACGGTCG AATTTGGGCG ACAACTGAAG AAGGTTTATA TCATCTAAAT
GGGCAAGACA AACAAGATAT ATTAACTAAA TTTAATCTAC CAAAGTTACA TGTTTATTCC
ATTCTGGAAA CTCACGACAA GCGTCTATTG GTGGCCACTG AACAAGGCGC TTTTATTTTA
GAAGATAATA GAGCCAGCAT TATACATCCT AGTTTGGCAG GTGAAGCCAT TAGCACTCTA
ATGGAAGATG ACGAAAACAA CCTGTGGTTA GGTACTATCA AAAATGGCTT GATAAAGGTC
AGCAATAGCC ATATAGAACG ACTAAATACT CATTCTGGTT TGCCAAATAA TCGAGTGTTA
TCCATATTAC AGGACTTCGA AGGCAGCATT TGGATTGGCA CTAATGGCGG TTTAGTGCGT
CTGCGCAAAG CGCCTTTTAC TACTTGGGCT AAGAGCCGCA ATCTAGTAGG CGATTATGTT
CGCAGCGTTA TCGACATCGA TTCAGATACT GTACTGGTTG GCTCAAGTGA AGGCCTTAGC
CTTATTCATA ACAATATCGC CCGCAATGCG CTTGCTAATA ATAGCGCCCC TATTTCTGTT
CTTAGCTTTA CTAAACAGCG TGATGGTGGC ATTTGGGTAG GCACTTATCT TAATGGCCTA
ATGCTCTGGA AAGATCAACA ATTAACCCCT CAATTTGATC ACCGGAATGG ATTGCCTAGC
GATGAAGTCA GATCCATTTT AGAGGACAGT CACGGCAACT TATGGATTGG GACAACCAAT
GGCCTTGTGC AACGAAATGC CGCTGGCCAA CAGCACATAT TCACTCGCAA TAATGGCTTA
CCTGACAATT ACATTATGGC ATTGGCGGAA GATGACCGAG GTCAAATTTG GGTAGGAACT
GGGGTGGGTG TTGCCAAACT AACATCCAGT GGTTTTGAAA TTATTCCCAT TAATAACCTC
GAAGAGGCTG AATATGCTTT TGGCTTCTGG ATGGAAGAAG GTTATGTCTG GATTGCTACA
GACCGCGGCT TAATTAGATA TAACCAACAA GATGGTCAGC TAGGCCTAGT TGGGCGGCGC
TCAGGCTTGC CCATCGACAA ACTATTCCAA GTAGTTTACG ACGGTACCAA TGGACTTTGG
CTAACCAGTA ATCGTGGCAT TTGGCGAGTC GACTATCATG AGGCTCATGC TGTGGCTGAT
GGCCGCCGAA GTGAGATTGC GTTTGAGCAT TTTTCAGAAA GTGATGGATT AGCAAGTGCT
CAAGCAAATG GCGGCTCGAA CCCTGCAGCG GTTGCTATGG ACAATGGCAA GCTATGGTTT
GCCACTTCAA AAGGTGTTGC CATGATAGAC AGCTCCACTA TCTCGCAAAA AAACACAACA
CGCTTACCTC TCACCATTGA ATCTATAGTA GCAGACGGGG TTGAACTATC TGCCAACCAA
CAAAACATAT TACCTGCAGG CACAAATAGA GTGGTATTTA ACTATGCAGG ACTCGGATAC
ATCATGTCAT CCCGTATTGA ATACCGTACA AAACTAGTGG GTTTTGAAGA TAACTGGGCT
TCTAGGGGTA AAAATACCAT TGCTGAATAT ACAAATTTAG CGCCTGGGAA ATACAAATTT
CTGGTCAGTG CGCGTTATCC TTATAGTGAT TGGAATAATG CCGACCAGGT TTATGAATTC
ACTATTTTAC CGCACTTCTG GCAGCGCATT GAGATACAAG TCGGCTTCGC GCTTTTGGTA
CTGATCATTC TTGCTGGCAG CATAAAATGG CGCGTACAAC GATTGCAAAA AAGTGAGCTA
AAGCTAAAAG CTCTCGTCGA AAAGCAAACC TATGCATTAC GTCAGCAATC GGAAGATTTT
CAGCGTCAAG CCAATGAAGA TAAGTTGACT GGTTTACCAA ATCGACGTGC TTTTGATAAA
TGGTTAAGCG AGAAGTTTAT TCAAGCCAAG CAGCAACATA CACCACTTGC TTTGATCATT
ATGGATATTG ATCACTTCAA AAAAATCAAT GATCACTACT CTCATCTGAT TGGAGATAAA
GCCATTAAAG CGCTCGCCAA ACAATTGCTG CAGCTTGCTG ATCATCAGAT ACATGCAGCT
CGCTGGGGGG GGGAAGAGTT CACCTTGATG ATTAAAGATA TGAATGATGC AAATGTGGCT
GCTTATTGCG AAAACCTCCG CAACAGCATT GAAACTTATG ACTACAGCGA TATCGCCGCC
GATTTAACCA TGACTGTCAG CATGGGCGTA GCGTTTTCTC ATCAAGTAGA GAACTACCAA
GATTTACTTC GCCTCGCCGA CCAAGCCTTA TATCGAGCCA AAGAACAAGG CCGTAATCGA
GTTGAAATTT GGCAGTAA
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| Protein sequence | MTLIYSHRTT PLWLGIMLLC ALNVAHANTS TPLSDYFKDT WSTHEGLPHN SINAIAQTSD
GYIWFATWEG VARYNGRDFR FYERSDKTGI LDSGIRTLVS DANNGLWIAG VRGGITYRQG
NQWQPQFAAA SMVNNVLKDS SGGLWIAVEG LGVFHRPKPH VENGAIEEVW VLQNISAYRL
LEDSNGRIWA TTEEGLYHLN GQDKQDILTK FNLPKLHVYS ILETHDKRLL VATEQGAFIL
EDNRASIIHP SLAGEAISTL MEDDENNLWL GTIKNGLIKV SNSHIERLNT HSGLPNNRVL
SILQDFEGSI WIGTNGGLVR LRKAPFTTWA KSRNLVGDYV RSVIDIDSDT VLVGSSEGLS
LIHNNIARNA LANNSAPISV LSFTKQRDGG IWVGTYLNGL MLWKDQQLTP QFDHRNGLPS
DEVRSILEDS HGNLWIGTTN GLVQRNAAGQ QHIFTRNNGL PDNYIMALAE DDRGQIWVGT
GVGVAKLTSS GFEIIPINNL EEAEYAFGFW MEEGYVWIAT DRGLIRYNQQ DGQLGLVGRR
SGLPIDKLFQ VVYDGTNGLW LTSNRGIWRV DYHEAHAVAD GRRSEIAFEH FSESDGLASA
QANGGSNPAA VAMDNGKLWF ATSKGVAMID SSTISQKNTT RLPLTIESIV ADGVELSANQ
QNILPAGTNR VVFNYAGLGY IMSSRIEYRT KLVGFEDNWA SRGKNTIAEY TNLAPGKYKF
LVSARYPYSD WNNADQVYEF TILPHFWQRI EIQVGFALLV LIILAGSIKW RVQRLQKSEL
KLKALVEKQT YALRQQSEDF QRQANEDKLT GLPNRRAFDK WLSEKFIQAK QQHTPLALII
MDIDHFKKIN DHYSHLIGDK AIKALAKQLL QLADHQIHAA RWGGEEFTLM IKDMNDANVA
AYCENLRNSI ETYDYSDIAA DLTMTVSMGV AFSHQVENYQ DLLRLADQAL YRAKEQGRNR
VEIWQ
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