| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2673 |
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| Symbol | |
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| ID | 5365405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 3018405 |
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| End bp | 3020348 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640805048 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001341521 |
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| Protein GI | 152996686 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.488379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGG AATCATCAAC TCAAGAAGTT GTTATTCACG AGCCTGCGAT GATATCAGTA
TTAAGAAATG GCTTGGGAGT GTTAATCGCT CTCGCCGCCA TTGCTTTTGC CGCTGATCTT
TTCAGCCGCT TAGGAATTGC AATTTATACT GAGCAATATC TAGCGGTGAT CTTGGGGATC
AGCTTAGCGC TGGTCTTTCT AAAACCCCAA AGTAGCCAAT TAAAACGCAG CCTAAATGGT
CTGCTTGCGC TACTCGGTTT GATCACCAGT CTATATTTAG CTGTGCAATA TCCGGATCTT
GTTGAGCGGC AACTCGATCT TCCTTTAGAT GCCTTAGCAG TTTCCGCCAT ACTATTTGTT
CTGGTATTGG AAGGATTAAG ACGAGTAGTT GGGCTCACCT TAGTCATTGT CGTCATGCTA
TTTATGGTAT TCGCCCTACT AGGCAGCCAT CTTTCAGGCC CTCTACAAAC ACGTGACATT
GACCTAGATA GACTCTTCGT TTATCTAGGT GTCGATACTA ACGGTATGTT AGGGCTAACC
CTTAACGTAG CAGCAACCAT TGTTATTGGC TTTATTTTAT TCGGGCAGCT GTTACTTCGT
TCTGGTGGAG CTGACTTTTT CAATGATATT GCTTTAGCTC TAATGGGTCG AAGCAAAGGT
GGTTCAGGCA AAATCGCCAC TATCGCTTCA GCGTTATTTG GCTCCATTTC CGGCGTCGTT
GTATCGAATA TTGTGGCTAC AGGTGTCGTC ACTATTCGTA TGATGAAAAA AGGTGGATTC
AAACCTCACA CGGCAGCCGC TATTGAAACT GTTGCATCAA CGGGCGGGCA AATTATGCCT
CCTGTAATGG GGGCTGTGGC TTTCTTGATG GCAGAATTCC TGCAAATTGG TTATAGCGAG
GTGGTCATTG CCGCTTTGGT GCCTGCCATT CTTTACTATG CGGCACTGTA TATCCAAGTA
GATTTAGAAG CGGCAAAAGA ACAAATCAAA CCGATTGATC CTGCACTTAT TCCCTCTAAA
AGAAAGGTTA TACAGCAAGG TTGGATTTTT ATCATTCCTT TCGCTGCCGT TATTTTAGCC
CTCTTTAGCT TTAACCAACG TCCGGAAACG GCCGCACTTT GGGGTGCTCT TGGCGCACTA
ATTGTTGGTG TATTAAAAGG TTATAAGGGC AAACGCATGG GCGCTAAAGA TATCTTGGGC
AGCCTAGAAG AAACTGGGCA TTCTATTGTC GATATCATCA TGATTGGTGC CGCTGCAGGG
TTCATTATCG GCATACTAAA TATCACTGGT TTAGGCTTCG GATTAACCTA TTTCTTGGTC
GAATTAGGCC AAGGCAATCT ATTCCTCTTA CTGGTCATTT CTGCTGTGGT TTGCATCGTA
CTCGGCATGG GAATGCCAAC CGTCGGCGTG TATTTATTAC TCGCTGTTTT AGTCGCACCC
TCATTAATTC AAGTTGGTGT AGAACCCATC GCAGCACATC TGTTCATCTT CTATCTGGGC
ATGATGTCCA TGGTGACGCC GCCGATTGCC ATCGGCGCTT TCTTTGCAGC CAGCATTGCC
AAGGCGAATC CAATGAAAAC AGCATTGACC TCAATGAGAC TCGGTTGGAC TGCATACATT
ATCCCATTCT TGTTTGTCAC AACGCCGTCA CTCTTATTAA TCGGAGAGAC GTCACAAATT
GTCATTACTG TGATGAGCGC ACTGATCGGT GTTTGGGCAG TATCGGTAGG CTTTGCGGGT
TACTTCAAAA ACAATCTAAA TCTCGTATTT CGATTTGGCT TTGTCATCGC GGGAAGCTTA
TTTTTGCTGC CAAATTTACA AGGCGGTGAT ACGCCAATTG CTCCAAAGGT GGCAGGTCTG
GCTCTATTAG CTACTCTACT TTGCGCAACT CTTCTCTTTA ATAAAGCAAC GTCTCAAGCA
TCATCTAAAC AGACTCAATC TTAG
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| Protein sequence | MNTESSTQEV VIHEPAMISV LRNGLGVLIA LAAIAFAADL FSRLGIAIYT EQYLAVILGI
SLALVFLKPQ SSQLKRSLNG LLALLGLITS LYLAVQYPDL VERQLDLPLD ALAVSAILFV
LVLEGLRRVV GLTLVIVVML FMVFALLGSH LSGPLQTRDI DLDRLFVYLG VDTNGMLGLT
LNVAATIVIG FILFGQLLLR SGGADFFNDI ALALMGRSKG GSGKIATIAS ALFGSISGVV
VSNIVATGVV TIRMMKKGGF KPHTAAAIET VASTGGQIMP PVMGAVAFLM AEFLQIGYSE
VVIAALVPAI LYYAALYIQV DLEAAKEQIK PIDPALIPSK RKVIQQGWIF IIPFAAVILA
LFSFNQRPET AALWGALGAL IVGVLKGYKG KRMGAKDILG SLEETGHSIV DIIMIGAAAG
FIIGILNITG LGFGLTYFLV ELGQGNLFLL LVISAVVCIV LGMGMPTVGV YLLLAVLVAP
SLIQVGVEPI AAHLFIFYLG MMSMVTPPIA IGAFFAASIA KANPMKTALT SMRLGWTAYI
IPFLFVTTPS LLLIGETSQI VITVMSALIG VWAVSVGFAG YFKNNLNLVF RFGFVIAGSL
FLLPNLQGGD TPIAPKVAGL ALLATLLCAT LLFNKATSQA SSKQTQS
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