| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2644 |
|---|
| Symbol | |
|---|
| ID | 5365433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2988455 |
|---|
| End bp | 2989369 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640805018 |
|---|
| Product | protein-export membrane protein SecF |
|---|
| Protein accession | YP_001341492 |
|---|
| Protein GI | 152996657 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0946476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00035144 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGA CAAATATTCC GTTTATGGCA ATGCGTAAAA TCGTAGCTGT CTTTTCACTT
ACGCTGATAC TGATCTCTCT TGTCTCTTTG GCAACAAAGG GGCTGCAGTT TGGCTTAGAT
TTTACTGGCG GTACCTTGAT TGAGGTAGCT TATAAAGAGG CGCCGCAGCT AGATGATGTG
CGTACGCTGC TAGGTGAAAA TGGCTACTCT GATGTTGTTG TGCAGAACTT TGGTTCGCCA
ACTGATGTTG TTGTTCGTAT GGCCAACTCT TACACGGCGA CTCTTGGTGA TGAAGTGTTA
GCTACGCTTC AAAACCATGG TGCAACTGAT GTATCGCTAC AGCGCTCTGA GTTTGTGGGT
GCGCAAGTGG GTGAGGAGTT GCGTGAGCAA GGTGGTTTAG GCATGTTGCT TGCCTTGGCT
ATCGTGATGA TTTACGTAGC AGTGCGCTTC CAGTTTAAAT TCTCTGTAGC CTCTGTTGCG
GCTTTGATTC ATGATGTGAT TATCACGTTA GGTTTCTTTT CTATCTTTGA GGTGGAGTTT
GATCTGACGG TGTTAGCGGC TTTGCTTGCC GTGGTTGGTT ATTCTTTGAA TGATACGATA
GTGGTGTGTG ACCGGATTCG TGAGAATTTT CGTATTATGC GTGATACAAC ACCGTATGAT
TTAGTGAATG ATTCTATTAA TCAAACGCTG GGTCGTACTT TGATTACATC ATTAACGACT
TTGTTTGTAT TGGTTGTTTT GTTTTTTTCA GGTGGTGAGG CTATTCATAA CTTCGCCATG
GCCTTGTTGG TAGGGATTGT GATTGGTACT TATTCTTCTA TTTTCGTGGC GGCAAATTTG
CTGTTGGCGA TGGGGGTTAA GCGAGAAGAT TTGATCCCAG CGCCAAAGGC TGAATTGGAA
GACGAGTTAC CTTAA
|
|---|
| Protein sequence | MKVTNIPFMA MRKIVAVFSL TLILISLVSL ATKGLQFGLD FTGGTLIEVA YKEAPQLDDV
RTLLGENGYS DVVVQNFGSP TDVVVRMANS YTATLGDEVL ATLQNHGATD VSLQRSEFVG
AQVGEELREQ GGLGMLLALA IVMIYVAVRF QFKFSVASVA ALIHDVIITL GFFSIFEVEF
DLTVLAALLA VVGYSLNDTI VVCDRIRENF RIMRDTTPYD LVNDSINQTL GRTLITSLTT
LFVLVVLFFS GGEAIHNFAM ALLVGIVIGT YSSIFVAANL LLAMGVKRED LIPAPKAELE
DELP
|
|---|
| |