| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2607 |
|---|
| Symbol | |
|---|
| ID | 5365147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2946510 |
|---|
| End bp | 2949212 |
|---|
| Gene Length | 2703 bp |
|---|
| Protein Length | 900 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640804980 |
|---|
| Product | preprotein translocase, SecA subunit |
|---|
| Protein accession | YP_001341455 |
|---|
| Protein GI | 152996620 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.065848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000349821 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGGAA CTGTAATTAA AAAAATTGTC GGTACAAAGA ATGACCGAGA AGTTAAACGA
TATAGAAAAA TCGTTGCACA GATAAACCAG CTTGAAGAAT CTTTTCACAA ATTGTCGGAT
GATGATTTGT CTGGGAAAAC GAGCGAGTTT CGTGATCGTC TTGCAAAAGG TGAATCTCTA
GAATCTATTT TGCCTGAGGC TTTTGCGGTG GTACGTGAGG GCAGTAGCCG TGTTATGGGG
ATGCGCCATT TCGATGTACA GCTCATTGGT GGCATGGTTC TTAATGAAGG TAAAATCGCT
GAAATGCGTA CAGGTGAAGG TAAAACGCTT GTAGCGACAC TGGCTGTTTA CTTAAATGCT
TTATCTTCTA AGGGTGTTCA CGTCGTTACG GTGAATGATT ATCTGGCTAA GCGTGACGCT
AACTGGATGC GACCTTTGTA TGAATTTTTA GACATGAGTG TTGGTGTGGT TTTCTCTGGT
CAGGATCGTG ACGAGAAGAA GGCTGCATAC TTGTGTGATA TTACCTATGG TACCAATAAC
GAGTTTGGTT TTGACTATCT CCGCGACAAC ATGGTTTTTC GTTTAGAAGA TCGTGTTCAG
CGTGACTTGC ATTTCTCTGT GGTAGATGAA GTGGACTCTA TCTTGATAGA TGAAGCTAGA
ACGCCTCTTA TTATTTCTGG TGCGGTTGAA GACAGCTCTG AACAGTATCG TAAAATTAAT
CAGCTCGCCC CACTATTGGT AAAACAAGAG GACACTGATG AAGAGGGGTC TGTAGGACAT
TACGTCTTCG ATGAATCTCA ACGTAGTATT GAATTGACAG AAGATGGTCA TTCTTTTGTT
GAGGAGTGGT TGGTTGAGCA AGGAATGTTA GCTGAAGGTG AAAGCTTATA TGCAGCTGGA
AACCTGTCTT TGTTGCATCA TGTCCATGCT TGTCTTAAAG CACACGTCAT TTTCAAAAAG
AACATAGATT ATGTCGTTCA GGGTGACCAG ATTGTTATCG TTGATGAACA TACGGGTCGA
ACCATGGCGG GTCGTCGTTG GTCTGAAGGT ATTCATCAGG CGGTAGAGGC GAAGGAAGGC
GTTACCATTC AGGCAGAAAG TCAAACTCTG GCGTCTACGA CTTTCCAGAA CTACTTCCGC
TTGTATGAGA AGCTGTCTGG TATGACGGGG ACTGCGGATA CTGAAGCATT TGAGTTTCAA
CAAATTTACG GATTATCCGT TATTGTTATT CCTACCAATC GTCAGGTTCA GCGTAAAGAC
TTCAATGACT TAATTTACAT GTCAACTGAA GACAAATTTG AAGCCATTGT GTTGGATATT
GAAGAGATTG TTAATCAGGG TCGTCCTGTT CTTGTTGGTA CGGCTTCTAT TGAATATTCT
GAGCTTTTGT CAAACTACCT TGTTAAGAAA GGTGTTAAGC ATAATGTTTT AAATGCTAAG
CAGCATGAGC GCGAAGCTGA AATTGTTGCT GATGCCGGTC GTCCTGGTGC GGTAACAATT
GCAACAAACA TGGCTGGCCG TGGTACGGAT ATTGTGTTGG GTGGCAACCT TCAGGTTGAG
TTAGCTAAGC TGGGTGAAAA TGCTAGTGAA GATGAAATCA ATGCTTTAAA AGCTGATTGG
AAAGCTCGTA ATGAGTCAGT TCTTGCTGCC GGTGGTTTAC ATATCATTGG TACAGAGCGC
CATGAATCAC GCCGTATTGA TAATCAACTT CGTGGCCGTG CTGGTCGTCA AGGTGATGTT
GGTTCGTCGC GCTTTTATTT GTCATTAGAA GATAATTTAA TGCGTATTTT CATGTCAGAT
CGCATCAAGA AAATGATGAT GGCGCTCGGT ATGGAGAAAG GTGAAGCGAT TGAGCATAAG
ATGGTTTCTA ATGCGATTGA AAAAGCACAG CGCAAAGTAG AAGGGCGTAA CTTTGACATT
CGTAAGCAAT TGCTTGAATA CGATGATGTT GCTAATGATC AGCGTCAAGT AATTTATCGT
CAGCGTTTTG ATATGATGGT GTCTGAAGAT CTATCTGAAG CTATTTCCGC AATGCGAGAA
GAAGTTGTTA CCAGCTTGGT TGATGAATTT ATTCCACCTC AAAGTATTTT CGATATGTGG
GACCTTGAAG GGTTGGAAGA GAAGGCTCGT AACGAATTTG GTCTAGAGCT TCCTGTTGCG
AAATGGGTAG AAGAAGATAA GAAACTTTAT GAAGAACCTT TGCGTCAGAA AATATTAGAC
ACGTTTGTTA ATGATTATCA GGCGAAAGAA GAAATTGCTG GTGAACAGCC ATTTAGAGCT
TTCGAGAAAC AGGTGCTGTT GCAGGTTCTT GATACACTGT GGAAAGAGCA TCTTCAGACA
ATGGATATGC TTAGACAGGG TATTCATTTA CGTGGTTATG CGCAAAAGAA CCCTAAGCAA
GAATATAAGC GTGAATCATT TGAATTGTTC CAAGGTTTGT TAGAGCAAAT TAAATACGAA
GTGATTCAGA TCATTACTCG TGTGAAAGTA CAGTCTGCTG AAGAGGCAGA AAAAATCGAA
GCGGCTCGTA GACTGCAAGA GGAAAAAACG ACCATGAATA TGATTCATGA CTCGTTAGAT
TCCTTGTCTG ACGGTGGTTC TGATTCTGCT GATGGTCAAG AGTATCCTAA AGTGGGTCGC
AATGAGCCTT GTCCATGCGG TTCAGGTAAA AAATACAAAC AATGTCACGG TAGTCTTGTT
TAA
|
|---|
| Protein sequence | MLGTVIKKIV GTKNDREVKR YRKIVAQINQ LEESFHKLSD DDLSGKTSEF RDRLAKGESL
ESILPEAFAV VREGSSRVMG MRHFDVQLIG GMVLNEGKIA EMRTGEGKTL VATLAVYLNA
LSSKGVHVVT VNDYLAKRDA NWMRPLYEFL DMSVGVVFSG QDRDEKKAAY LCDITYGTNN
EFGFDYLRDN MVFRLEDRVQ RDLHFSVVDE VDSILIDEAR TPLIISGAVE DSSEQYRKIN
QLAPLLVKQE DTDEEGSVGH YVFDESQRSI ELTEDGHSFV EEWLVEQGML AEGESLYAAG
NLSLLHHVHA CLKAHVIFKK NIDYVVQGDQ IVIVDEHTGR TMAGRRWSEG IHQAVEAKEG
VTIQAESQTL ASTTFQNYFR LYEKLSGMTG TADTEAFEFQ QIYGLSVIVI PTNRQVQRKD
FNDLIYMSTE DKFEAIVLDI EEIVNQGRPV LVGTASIEYS ELLSNYLVKK GVKHNVLNAK
QHEREAEIVA DAGRPGAVTI ATNMAGRGTD IVLGGNLQVE LAKLGENASE DEINALKADW
KARNESVLAA GGLHIIGTER HESRRIDNQL RGRAGRQGDV GSSRFYLSLE DNLMRIFMSD
RIKKMMMALG MEKGEAIEHK MVSNAIEKAQ RKVEGRNFDI RKQLLEYDDV ANDQRQVIYR
QRFDMMVSED LSEAISAMRE EVVTSLVDEF IPPQSIFDMW DLEGLEEKAR NEFGLELPVA
KWVEEDKKLY EEPLRQKILD TFVNDYQAKE EIAGEQPFRA FEKQVLLQVL DTLWKEHLQT
MDMLRQGIHL RGYAQKNPKQ EYKRESFELF QGLLEQIKYE VIQIITRVKV QSAEEAEKIE
AARRLQEEKT TMNMIHDSLD SLSDGGSDSA DGQEYPKVGR NEPCPCGSGK KYKQCHGSLV
|
|---|
| |