| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2548 |
|---|
| Symbol | |
|---|
| ID | 5369008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2848949 |
|---|
| End bp | 2849707 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640804911 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_001341402 |
|---|
| Protein GI | 152996567 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00992878 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCAG TAGAGCGGCA AAGAAAGATC CTGACATTAT TAAAGAATCA AGAAGTAGTG
AGTATTTCAG AGTTGGTTGA TTTATTTAAT GTGTCTCATA TGACTATTCG CCGAGACATT
GAAAAACTTG AGGCTATTGG CAAAGTTAGT TCAGTTTCTG GAGGTGTGCA GCTAGCAAGA
AACATTCATA TTGAGCTCTC GCATGATATT AAAATAACCC AGTTTGCCAC TGAGAAAGAG
CAAATTGGCA AGTTGGCATC GAGTATCATT GCTCCAAATA TGACGATATA CCTTGATGCA
GGCACCACAA CGTTAGAAAT TGCTCACCAA ATAACCCAAA GAAATGACCT GCTCATTATC
ACTAATGATT TTGCTATATC GGCTTACTTA ATGGCGAATT CGGCTAACGA TATTTACCAT
ACAGGCGGAA AAATCGACCG ACAGAACCAG TCTACCGTTG GATCAAAAGT AGCTGATTTT
TTATTAAGCA TGAACATTGA TATCGCCTTT ATCTCGACCT CGTCTTGGAA TTTAAAAGGG
CTATCTACGC CGAATGAAGA TAAAGTCATT GTTAAGCATG CTATTGCCAA ATCATCGAAA
ACTGTCTGTC TAGTTTCCGA CACCTCTAAA TATGGGAAAA TTGCCGCCTT TCATGCATTG
GATATGGAGC GAATTGATAC CATTATCACC GACTCAGGTC TGCCAGAAAG TGCGTTCAAT
GAATTGAGAG ATAAAGGTAT TGATATTTTA ACTGCTTGA
|
|---|
| Protein sequence | MIPVERQRKI LTLLKNQEVV SISELVDLFN VSHMTIRRDI EKLEAIGKVS SVSGGVQLAR
NIHIELSHDI KITQFATEKE QIGKLASSII APNMTIYLDA GTTTLEIAHQ ITQRNDLLII
TNDFAISAYL MANSANDIYH TGGKIDRQNQ STVGSKVADF LLSMNIDIAF ISTSSWNLKG
LSTPNEDKVI VKHAIAKSSK TVCLVSDTSK YGKIAAFHAL DMERIDTIIT DSGLPESAFN
ELRDKGIDIL TA
|
|---|
| |