| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2517 |
|---|
| Symbol | |
|---|
| ID | 5368374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2818338 |
|---|
| End bp | 2819243 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640804880 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_001341371 |
|---|
| Protein GI | 152996536 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.251685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAA AGTATCAAGT CGCATTGGCA GAAGCTATTC TGCTAATGCT GACCATCTGT
GTATGGTTTT GCCCTATACA GTGGCGTCAT TACAAGTGGG TTGTTTCGCT TTATGTAGCG
TTTATCTTTG CCTGTATTTT AATCGGAATC AGCTTTTCTC CTTTGTATTC TGGTCGACAG
GTTTGGGTGC TTATTTTCCC CATGACCTCC TATCTTATGT TGGGTAAACG CACAGGCTTT
TGGTTGAGCG CTGTTTGCCT TTGTCTGGTT AGCACCATTC TATTTTTGCG CTTTTATGAT
GATTTTAAAG GCGGGCTAAT TAGTATTGTC GTGAACTTGT TTCTAGCTTA TGTCTTCTTA
TGGGGGCTAA CTCACGGTGC CGAGCGAGTT CACAAGAAAA TGTTATATGC TTTAAAGAAA
ATAGCTTCCA CCGATCCTCT AACAGGGCTT GCCAATCGCC GTAATGTTAG TCAAAACTCG
CAATATCAAC TTCAGCAAGT TACTGGGATG GGTGATGAAT TAGCACTTGT TTTGATAGAT
CTAGATAATT TCAAAAAAAT AAATGATATA CATGGACATG AAGTTGGTGA CGCGGTGCTG
GTGGACTTTG CTGAGCGATT AAGGGCGCAT GTTGATGATA ACGAGCAGCT ATTTCGCTTA
GGTGGAGAAG AGTTTTGTGT TTTTATGCCA GCAGCGCAAA GCAAGAACTG GTCAGTCGCA
TTTTGCCAGT ATGTAGATGA CTCTCTATTT TATTTTGATG AGCTGGAAAT TCATTATACT
GTGAGTATTG GCGTGTCTTG TAGTCAGAAA GGGCGCGGTG ATTTTAAGCA CTTATACAGA
ATTGCCGATC AGCGGTTATA CAAAGCAAAA AGCCTTGGTC GGAATGGTGT TGTTTTAATG
GATTGA
|
|---|
| Protein sequence | MAAKYQVALA EAILLMLTIC VWFCPIQWRH YKWVVSLYVA FIFACILIGI SFSPLYSGRQ
VWVLIFPMTS YLMLGKRTGF WLSAVCLCLV STILFLRFYD DFKGGLISIV VNLFLAYVFL
WGLTHGAERV HKKMLYALKK IASTDPLTGL ANRRNVSQNS QYQLQQVTGM GDELALVLID
LDNFKKINDI HGHEVGDAVL VDFAERLRAH VDDNEQLFRL GGEEFCVFMP AAQSKNWSVA
FCQYVDDSLF YFDELEIHYT VSIGVSCSQK GRGDFKHLYR IADQRLYKAK SLGRNGVVLM
D
|
|---|
| |