Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2496 |
Symbol | |
ID | 5365910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 2799755 |
End bp | 2800681 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640804859 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001341350 |
Protein GI | 152996515 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0383135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCAC TAACTGACAT TATTACTGGT CTGCATATTC GCGAAGCCAA TTTCACCCGA ATGGATGCCA GTGCGCCATG GGGTGTTAAA TCGAACGGTG AACACGGTAT TAATTTTGTG TTACTGGTTC GCGGTTCTGC AATCTTGACT ACGCCTAGCA GTTCGGAAGC AATCGCACTC AGTAGCGGTG ATGTGTTTCT CTTGATGGGC GATGCGCCTT ACCAGCTTTT TGACCATGAG AAGTCGACTC TTATTGACTG TGTAGAGGTG GAGAGGTTAC GAAGAGGTAA CTCGATAGAG ATCGGTGGTG GTGGTTCAGT CACGAGTTTT ATCAGTGCCT CATTTGACCT GCATGCCATA GAAGCTCAGC CATTGTTACA TGTGTTGCCA GAACTCTTGC ACTTAAAACT CGACCAGCGC CGAAGTTTGG CCTTCCAATC CGTAATTGAA ATGCTGGCGC TCGAAACCGA GTCGCCAGGC TTGGGTTCAG AGGCTTTAGT GAGTCGCTTG TTCGAATTGC TATTTGTGCA CGCGATTCGC GCTTATTCGA TGCAACCCGG CGGTCCAACA CAGGGTTGGC TAAGTGCCTT CGCCAATCGC AATTTGAGGC AGGCACTGGA AGCTATGCAT CGTGCCCCGG AGCAGGTCTG GACTGTAGAA TCGCTGGCGC ACACAGCTGG TATGTCACGC TCCAGTTTTG CGGCGTGCTT CAAAGCTGTG GTTGGCCAGT CGCCATTAGA TTATTTGACT CGGTGGCGTA TCTACTGTGC AACCCGTTTG TTGCAGCATG GTAATCTTAC CTTGTCTGAA ATATCTAGTC AGGTTGGCTA CGAATCTGTA TCTGCGTTCA GTCGTGTGTT TGTGCGCATA ACAGCGAAGA CCCCCGGCGC CTTTCGCAAA TCAATTGTAG AAGCTAAACA GAATTAA
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Protein sequence | MDPLTDIITG LHIREANFTR MDASAPWGVK SNGEHGINFV LLVRGSAILT TPSSSEAIAL SSGDVFLLMG DAPYQLFDHE KSTLIDCVEV ERLRRGNSIE IGGGGSVTSF ISASFDLHAI EAQPLLHVLP ELLHLKLDQR RSLAFQSVIE MLALETESPG LGSEALVSRL FELLFVHAIR AYSMQPGGPT QGWLSAFANR NLRQALEAMH RAPEQVWTVE SLAHTAGMSR SSFAACFKAV VGQSPLDYLT RWRIYCATRL LQHGNLTLSE ISSQVGYESV SAFSRVFVRI TAKTPGAFRK SIVEAKQN
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