| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2475 |
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| Symbol | |
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| ID | 5368232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 2784150 |
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| End bp | 2785766 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640804840 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001341331 |
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| Protein GI | 152996496 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.172611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAA GCAGTACAGA ACATCAAAAT AACCACCAAA AAATGTACAA AATCATGTCC
TATGGTTCCA TTCTTATGGT CGGGGCATTC GTACTTTTTT CCATCTTAAA TGTAGATCTA
TCTAATGCTA TCGCGAATGG CATTAACGCT TGGATCCAGA GTAACCTGAG TTGGTATTAC
ATTGCTGTTG TTTGCTTTGT ACTATTTTTC TCGATATGGG TGGCATTTAG CCGCTATGGA
AATATTCGCC TGGGCAAGGA TGATGAGAAG CCTGAGTTTG GTTTTACCGC TTGGTTCTCT
ATGCTGTTTA GTTGCGCTAT CGGTACTGGC TTACTGTTTT GGAGTATTGC TGAGCCGATT
ACCTACCTTC AAGGCAATCC ATTTATAGAA ATGGAAAATG TGCAGCCCAA TACTTTAGAA
GCGGCGCAAG TCGCACTACG TATCACCATG TTCCATTGGG GACTTCATGG TTGGGCTATC
TATATTTTAG TCGGCCTTTG TTTGGCGTAT TTCTGTTATC GCAGAGGTTT GCCACTGACT
GTTCGTTCCG GGTTATATCC TCTTTTGGGC GATAAAATTT ATGGCCCAAT TGGTCATGCT
GTGGATTTTC TAGCCATCTT TAGCACGCTT TTTGGAACGG CCACGACGTT AGGCTTGGGT
GTTTCTCAAA TGAATGCTGG TCTTAACTAT CTTTTTGGTA TCGACATTTC GCTAACAACT
CAAATTATTT TAATCGCTGT AGTTTCTGTT ATCGCCACTG TTTCCGCCAT TTCAGGGGTT
GGGAAGGGCA TTAAAATATT GAGTATATGG AATATCCGCT TAAGTGTTTT GGTGATTGGC
TTTTTTGTTG TAGCAGGACC AACTGTATTC TTATTAGAAA CAACGGTTTC CAGTTTGGGT
GATTATTTCT CTAACTTCAT ACCGATGGGA TTTTGGGTAG ATACGGATCC GACTCGCCAG
TGGCAAAGCT GGTGGACCAT TTTTTACTGG GGATGGTGGC TATCTTGGGG CCCATTAGTT
GGGATGTTTA TCGCACGAAT TTCTCGAGGC CGTACTATCC GCCAGTTTAT GTTGACCGCG
TTAGTTATTC CTCCGCTAGG TGGCTTCATT TGGATCATTG TTTTTGGTGG AACGGCATTA
AACATCCAGC TATTTGGTGA TGGCAGTTTA GCAGGCGTTG TAAATGACAA TATAACATTG
GCTCTGTATA GCACGATTGA AGCGATTAAT GTGCCTTCGT TGACCAATCT TGTGGCTGGT
CTTGCGACAT TCCTCATTGT GACTTGGTTC GTGACGTCGG CTGACTCTGG CACCTTGGTG
ATTTGCACCA TTGTTTCTTT AGGCGATAAA AATCCACCTC GCTTCCTACG AGTTATTTGG
GGACTCGGGC TTGGCGCTGT TTCTGCGATC TTATTGATTG CGGGCGGTCT GGATTCATTA
AAAACGGCTT CTATTGTTGC GGCGTTACCT TTTTCCGTTG TCTTGCTGTT TATGTGTTGG
GCCTTGGTGA AAGGCTTGCA GGATGAAGCT CGTGGAACCA GTTATAACCA AGACGACCTT
GCTGGTAAGC ACTCTAAAAT AAGCGAACAT CAATATAACC CAAGCTCGGT CTCTTAG
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| Protein sequence | MKPSSTEHQN NHQKMYKIMS YGSILMVGAF VLFSILNVDL SNAIANGINA WIQSNLSWYY
IAVVCFVLFF SIWVAFSRYG NIRLGKDDEK PEFGFTAWFS MLFSCAIGTG LLFWSIAEPI
TYLQGNPFIE MENVQPNTLE AAQVALRITM FHWGLHGWAI YILVGLCLAY FCYRRGLPLT
VRSGLYPLLG DKIYGPIGHA VDFLAIFSTL FGTATTLGLG VSQMNAGLNY LFGIDISLTT
QIILIAVVSV IATVSAISGV GKGIKILSIW NIRLSVLVIG FFVVAGPTVF LLETTVSSLG
DYFSNFIPMG FWVDTDPTRQ WQSWWTIFYW GWWLSWGPLV GMFIARISRG RTIRQFMLTA
LVIPPLGGFI WIIVFGGTAL NIQLFGDGSL AGVVNDNITL ALYSTIEAIN VPSLTNLVAG
LATFLIVTWF VTSADSGTLV ICTIVSLGDK NPPRFLRVIW GLGLGAVSAI LLIAGGLDSL
KTASIVAALP FSVVLLFMCW ALVKGLQDEA RGTSYNQDDL AGKHSKISEH QYNPSSVS
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