| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2450 |
|---|
| Symbol | |
|---|
| ID | 5366497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2759199 |
|---|
| End bp | 2759684 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640804816 |
|---|
| Product | tripartite ATP-independent periplasmic transporter DctQ |
|---|
| Protein accession | YP_001341307 |
|---|
| Protein GI | 152996472 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.561337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTGA ATACTATACG TGCATCAGCG TATCGCTTGT TGTTGCTTAT ATCTGCATCC
ATTCTCGCTA TGAATGTATT GCTTATTTTG TATAGCGTAT TTACTCGCTA TATTTTAAAT
CATTCGCCTA TTTGGTCGGA TGAACTTTCT CGGTATGGCA TCATTGCCAG TGTCATGTTG
GCGATGTCTT GCGCTTATGT AGACTCTCGG CACATGAGAG TCTCTTTTGT CGAACAAAAT
GTCGGTCATA CTGCTCGTCA GTTGATTCGT ATGTATCAAT GGTTAGTAGT GTTGTGCGTC
TCATTATTTT TTACTTACGT AAGTGCACGT TACTCAATAT CCATGGGTAA ATTTGCCAGC
ATGAGTCTTG GCGTGAGTAA ATCGATTCCT TTGTTATCTG TGCCTATTGG CTTTGGTGCA
CTGTTTCTGA TGGTATTTAT ACAGGGACCA TTCCCGCAGA ATCAAGAGAG GAATGAAGTA
TGTTGA
|
|---|
| Protein sequence | MTLNTIRASA YRLLLLISAS ILAMNVLLIL YSVFTRYILN HSPIWSDELS RYGIIASVML
AMSCAYVDSR HMRVSFVEQN VGHTARQLIR MYQWLVVLCV SLFFTYVSAR YSISMGKFAS
MSLGVSKSIP LLSVPIGFGA LFLMVFIQGP FPQNQERNEV C
|
|---|
| |