| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2418 |
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| Symbol | |
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| ID | 5366628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 2725212 |
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| End bp | 2726687 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640804783 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_001341275 |
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| Protein GI | 152996440 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.969925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0433381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGT CTTTACAATT AAAGCTTGGT CAACAGCTGA CTATGACGCC ACAACTGCAA
CAGGCTATTC GCTTGCTGCA GCTTTCTACG TTGGATTTAA AACAAGAAAT TCATGAATTC
CTTGAATCGA ATCCCCTGCT TGAGCTTGAC GACGACGAAC AAATTCATTA CGACATCCCA
GCAAGCATTG AATCAAAAAG CGCTGCCGAT ACAACAGTCG ACAACAACAG CGAAGAACCA
CGCGTAGAAT CTGAGTGGAC TGAAAGCATC CCTGAAGAAC TATCCATAGA TAGTAACTGG
GATGATACCT ATCAAAGTTC CGCCGCTGTC AGCGATAGCA ACAGCTATGA AGGCGATAGC
GACTTCGAAA GCCGTAACGC ACCAGCAGAA AGCATCCAAG ACCATCTTAT ATGGCAATTA
AATTTAACCC ACATGTCAGA TCGCGACATT GAAATCGCTT ACGCCATCAT TGAATGCGTG
CAGCCAGACG GCTATCTAAG CATTTCGCCT GATGATATTT GCGAATCTCT AAGTATTGAA
TTAGAAGACT TAGAATTAGA TGAAGTCATT GCAGTGCAAC ATAGATTGCA ACGCTTTGAC
CCTGTTGGTG TGTGCTCAAT CGATCTACGT GACTGCCTTC TTGTACAACT AGAAGCATTC
CAAAGCCACC CGCTGTATAA GAGCACATAC AATCTTATTG ATCATTATCT ACCATTATTA
GGTAATCGAG ATTTTGCTCA GTTGAGCCGT AAGACAAAAC TAAAAGACGA AGCCCTAAAA
GAAGTCGTCG ATTTGATTCA ACAGCTCAAC CCACGCCCAG GCTCAGTTAT CGACGCTGAC
GACACGGATT ACGTTATTCC AGATGTCACA GTGAAAAAAC GCCATGATGT ATGGCAAGTG
GAGCTAAACA ACGATGCTTT GCCGCCCATC AAAATCAATG AGACCTACTC AGCGATGGTT
AGCACCGCAG CAGCAACAGC AGAAGACGTG ACTTACATAA AAACCTCTCT TCAAGAAGCA
AAATGGTTCA TGAAGAGCCT ACAGAGCCGC AACGAAACTT TATTAAAAGT GGCGAGCTGT
ATTGTAAGTC GACAAATTGA TTTCTTCGAA TTAGGCGAAG AAGCCATGAA ACCCATGGTT
CTTCACGACG TTGCAGAAGA AGTAGGCATG CATGAATCAA CTATTTCCAG GGTAACAACA
CAGAAATACA TGCATACGCC GAAAGGCATC TTTGAGCTGA AATACTTTTT CTCCAGCCAT
GTAAACACTG CCTCTGGCGG AGAATGTTCT TCTACCGCAA TACGAGCTAT GATTAAAAAG
CTTGTGTCAG ATGAACCGGC GAAAAAACCG TTAAGCGATA ACAAGCTAGC TGCTATTTTA
GCAGACCAAG GCATACAGGT TGCTCGACGC ACTGTAGCCA AATATCGAGA GGCGATGAAC
ATCCCTCCTT CCAATGAACG AAAACGACTG ATCTAA
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| Protein sequence | MKQSLQLKLG QQLTMTPQLQ QAIRLLQLST LDLKQEIHEF LESNPLLELD DDEQIHYDIP
ASIESKSAAD TTVDNNSEEP RVESEWTESI PEELSIDSNW DDTYQSSAAV SDSNSYEGDS
DFESRNAPAE SIQDHLIWQL NLTHMSDRDI EIAYAIIECV QPDGYLSISP DDICESLSIE
LEDLELDEVI AVQHRLQRFD PVGVCSIDLR DCLLVQLEAF QSHPLYKSTY NLIDHYLPLL
GNRDFAQLSR KTKLKDEALK EVVDLIQQLN PRPGSVIDAD DTDYVIPDVT VKKRHDVWQV
ELNNDALPPI KINETYSAMV STAAATAEDV TYIKTSLQEA KWFMKSLQSR NETLLKVASC
IVSRQIDFFE LGEEAMKPMV LHDVAEEVGM HESTISRVTT QKYMHTPKGI FELKYFFSSH
VNTASGGECS STAIRAMIKK LVSDEPAKKP LSDNKLAAIL ADQGIQVARR TVAKYREAMN
IPPSNERKRL I
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