Gene Mmwyl1_2303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_2303 
Symbol 
ID5365570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp2593834 
End bp2594805 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content44% 
IMG OID640804663 
ProductRluA family pseudouridine synthase 
Protein accessionYP_001341160 
Protein GI152996325 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACT CAGAACTAAA ATCAGCAGAG CGTCCCGCGG TTCGTTACGT CACGATTGAC 
GACAATAATA CGGGTCAGCG AATCGATAAT TTTTTGGTTA CCTTTTTAAA GGGTGTTCCG
AAAGGCAAGA TTTACAACTT ACTTAGGAAA GGGGAAATCC GCGTCAATAA GAAGCGAACC
AAGCCTGACT ATCGCCTTCA AAATGAAGAT GTTGTACGTA TTGCGCCAAT TGTTATTGCG
CCAGAATCCG ACAAGCCCGT CTTGTCAGAT CGCCTTAAAA GCGAGATAGA ATCACGCATT
GTCTACGAGG ACAAGGGGTT GATCGTCATT AATAAACCTT CCGGCTTAGC CGTTCATGGT
GGCAGTGGTT TGAGTTTCGG TTTGGTTGAA GTTATTCGCC AAATGCGGCC GCTAGAGAAG
TTTATTGAGC TTGTTCATCG ACTTGACCGT GATACTTCTG GTCTGATCAT GGTCGCTAAG
AAGCGCGCTG TCCTCAAAGA ATTGCATACC GCATTACGCG AAAAAGAAGG TGTGCAAAAA
ACTTACCTTG CATTGGTTTA TGGCAGCTGG CCTAAAAGAA AATTACAAGT TAACGCACCT
TTATTAAAAA ATGAGCTGCA ATCTGGTGAG CGTGTTGTCA GAGTGCATAC TGATGGAAAA
GAGAGTTTGA CTCGGTTTAA ACTTGTTCGA CAGTTTGAAG GTTATAGTTT GGTTGAGTGT
GAGCCAGTAA CAGGGCGTAC GCATCAAATT CGAGTTCATA CCCAATATGC AGGTTATCCG
ATTGTTGGCG ATGAAAAATA TTCGCCTGCT GAGTCCTTAA AAGAGACAAG AGCTCTTGGC
TTTAAACGTC TGTGTCTGCA TGCGACACGG TTAGATATTA TGTTGAATGG CGAACGCATG
CTGTTTGAGG CGCCACTTGA TAAAGAATGG CAAACCTTGA TGAATGAAAA TCTAACTGGG
ATTTTCTCTT AA
 
Protein sequence
MSDSELKSAE RPAVRYVTID DNNTGQRIDN FLVTFLKGVP KGKIYNLLRK GEIRVNKKRT 
KPDYRLQNED VVRIAPIVIA PESDKPVLSD RLKSEIESRI VYEDKGLIVI NKPSGLAVHG
GSGLSFGLVE VIRQMRPLEK FIELVHRLDR DTSGLIMVAK KRAVLKELHT ALREKEGVQK
TYLALVYGSW PKRKLQVNAP LLKNELQSGE RVVRVHTDGK ESLTRFKLVR QFEGYSLVEC
EPVTGRTHQI RVHTQYAGYP IVGDEKYSPA ESLKETRALG FKRLCLHATR LDIMLNGERM
LFEAPLDKEW QTLMNENLTG IFS