| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2294 |
|---|
| Symbol | |
|---|
| ID | 5365899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2582927 |
|---|
| End bp | 2583883 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640804654 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001341151 |
|---|
| Protein GI | 152996316 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.666839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCCAG AGCTAAAATC AATAATATCT CGTTTGCGGT TCAAGCATTT GCAGCTGATT
GTTGCAATTG AAGATTATGG ATCCTTACAT AAAGCAGCAA TATCCATCTC AATTTCTCAA
CCGGGAGCGA CTAAGCTTCT TAACGAAGTA GAGAAGTCTA TCGGTTTTAA GTTATTTGAA
CGTACAGCAA AAGGCATGGT ACCAAATGAA GTTGGGAGTT GTGTAACTAG ATATGCCCGA
GTGATCTTTA ATGATTTATC TCATATGAGA GAAGAGATAG TGGGTATTGC AGAAGGCTCA
GGAGGACATA TCTCTGTCGG ATGCATTATG GGAGCTGTTC CAATTCTAAC TAGGGCTATT
TATGAATTAC GATGCGATCA GCCGGAACTC ACTGTCGAAA TATTTGAGAA CAATAGTGCG
AATTTACTGC ATAAAATTGA TCAAGGTCGT ATTGATTTTG CCGTATGTAG AGTCAGTAGA
GGGCAAAATA TTTTGCCATA CGACAATATA GCGTTAAGTG AGGAGCCTCT TGCAATTGTT
GCAAATAATG CTCATCCACT TTTGCAAAAT AGAGCAGTTA GTTTGGAGGA CTTAGCGGAT
CATCCTTGGG TGCTATACAC GTCAAATACT CCTATGCGCC AATCTATTGA GTATGAGATG
CAGAAGCTAG GTCTTGATAT TGTTAAGCAC CCTGTAGAGT CATCATCGGC ATTTTCGACG
ATAATGCTTC TTCAGTATGA TGTTAATCTT TTAGCCGTTC TTCCGTTAGA TGTAGCTGAG
TTCTTTGTAA GTAAAAACCT TATATCTTTG CTAGATATAA AAATAACCTC GTTGATGAGT
AAAATTGGCA TTGTAAAGCG CAAAGATTCG AATCTTACTT CAACCGCCCA TCTCTTAATT
TCAAAGCTAT ATGATGATGT AGGTTTGGTT TACGATCAAA ATGAATGGCA TCGATAA
|
|---|
| Protein sequence | MVPELKSIIS RLRFKHLQLI VAIEDYGSLH KAAISISISQ PGATKLLNEV EKSIGFKLFE
RTAKGMVPNE VGSCVTRYAR VIFNDLSHMR EEIVGIAEGS GGHISVGCIM GAVPILTRAI
YELRCDQPEL TVEIFENNSA NLLHKIDQGR IDFAVCRVSR GQNILPYDNI ALSEEPLAIV
ANNAHPLLQN RAVSLEDLAD HPWVLYTSNT PMRQSIEYEM QKLGLDIVKH PVESSSAFST
IMLLQYDVNL LAVLPLDVAE FFVSKNLISL LDIKITSLMS KIGIVKRKDS NLTSTAHLLI
SKLYDDVGLV YDQNEWHR
|
|---|
| |