Gene Mmwyl1_2293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_2293 
Symbol 
ID5365496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp2581326 
End bp2582342 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content37% 
IMG OID640804653 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_001341150 
Protein GI152996315 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.528549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAA TAAATATAAT AAATAAATTA TGTGCGGTTA CTTTTGCTGG TCTTCTACTT 
TCTTCAAGTG CTATTGCTGC AGATTTTAAT ATTAAAATAT CGCATTCTTC TCCTGCGACT
AACGATAGAT TAGAAAAATC TTTGGCTATA TTTAAAAAGA ATGTAGAGGA GAGAACCGAT
GGGCATATCT CTATTTCTAC TTATCCTGCC AGTCAACTAG GTGGCGAACG CGAGCAGCTT
GAAGGTGTTC AGTTTGGTTC TATTGAAATG GCGGTATTGG CGGGGCCAAT TCCTAACATT
TATCCTGATG CTATGGTTTT TGATTTGCCA TATCTGTTTA AGAACAGAGA AGTGGCATAC
AAGGTCATGG ATGGTGAATT TGGTGAAAAA ATATTAAATG GTATGTTAGA AAAAACTGGG
ATCCGAGCAT TAGCATGGGG TGAAAATGGT TTTCGAAATT TTGTAAATAA TGTTCGCCCT
ATTAAGACAC CAGCAGATTT ATCGGGTCTA AAAATCAGAA CGATGGAAAA TCAAGCACAC
ATTGCAATGG TCGATTCCTT TGGTGCAACT GCAACTCCGA TGGCCTTAAG TGAGCTGTAT
TCATCTCTTC AACAAGGTGT GATTGATGGT ATGGAAAATC CGATTTCCCT CATCGAAAGT
ATGCGCTTTT ATGAAGTTCA GAAATATCTT ACGCTAGATG GGCATGTCTA TAATCCCTTC
ACTTTTATTG TAAATAACAA CTTTTTTGAA CGCCTTCCTG TTAAATATCA AACAATTATT
CAGGAGGAAG CTAAGAACTG GAGTACTGTT GAACGAGAGC TGAATACCGA GCAAGAAAAC
AGTGGAATTG AAGAACTTAA GAAACAAGGT ATGCAAGTTG TTTATTTAAG TGATGAAGTT
AAAGGCGAAT TTCGCGAAAT TACAAAACCT GTCTACGATA CTTACCGAAA AAAATTGGGT
GATAAGCTAA TTAATGAATT GATGGATGCG GTTTCTAAGG CTGAAACCAG CCAATAA
 
Protein sequence
MSKINIINKL CAVTFAGLLL SSSAIAADFN IKISHSSPAT NDRLEKSLAI FKKNVEERTD 
GHISISTYPA SQLGGEREQL EGVQFGSIEM AVLAGPIPNI YPDAMVFDLP YLFKNREVAY
KVMDGEFGEK ILNGMLEKTG IRALAWGENG FRNFVNNVRP IKTPADLSGL KIRTMENQAH
IAMVDSFGAT ATPMALSELY SSLQQGVIDG MENPISLIES MRFYEVQKYL TLDGHVYNPF
TFIVNNNFFE RLPVKYQTII QEEAKNWSTV ERELNTEQEN SGIEELKKQG MQVVYLSDEV
KGEFREITKP VYDTYRKKLG DKLINELMDA VSKAETSQ