| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2283 |
|---|
| Symbol | |
|---|
| ID | 5365957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 2568181 |
|---|
| End bp | 2569458 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640804643 |
|---|
| Product | glycine hydroxymethyltransferase |
|---|
| Protein accession | YP_001341140 |
|---|
| Protein GI | 152996305 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.143968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.90339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACA CCGAAGCCTT TTTCAGCCAA ACTCTCGCTG AACGAGATCC AGAACTTTTT
GCAACAATCA CCGAAGAGCA AGAGCGTCAA GAAACTGGCA TTGAATTGAT CGCTTCTGAA
AACATCACTT CAAAAGCTGT TTTAGAAGCT CAAGGTTCTG TGCTAACTAA CAAATACGCC
GAAGGCTACC CGCATCGTCG TTACTACGGT GGCTGTGAAG CAGTTGACGT AACTGAACAA
CTTGCCATTG ATCGTGCCAA AAAACTTTTC AACTGTGAGT TTGTAAACGT TCAGCCTCAT
TCTGGCGCTC AAGCTAACGG TGCAGTTATG CTAGCACTAC TTCAACCTGG CGACACTATT
ATGGGCATGT CATTGTCTTC TGGTGGTCAC TTAACTCACG GTGCTGCACC AGCACAATCT
GGTAAGTGGT TTAACGCTGT ACAATATGAA GTAAGCCCAG AAACACTATT GATCGATTAC
GACGCTATTG AAGCGCAAGC ACTAGAATGC AAGCCAAAAA TGATTATTGC AGGTGGCTCT
GCCATTCCTC GTCAAATCGA CTTCAAACGC TTTCGTGAAA TCGCAGATAA AGTAGGTGCT
TATCTATTCG TTGACATGGC CCACATTGCA GGTCTTGTTG CGACTGGAGT TCATCCATCT
CCACTACCTC ATGCTCACGT TGTTACAACA ACAACACACA AAACTCTTCG TGGCCCGCGT
GGCGGCATGA TTTTGTCCAA TGATCTTGAT CTAGGCAAGA AAATCAACTC TGCCGTTTTC
CCAGGCTACC AAGGCGGCCC TCTAATGCAC GTTATTGCTG GTAAAGCTGT TGCATTCGGT
GAAGCCTTGA AACCTGAGTT TACTGACTAC ATTAAGCAAG TAGTAGCTAA CGCTAAAGCA
CTTGCTGAAG TAATGGTAGA ACGTGGCTGC GACATTGTAA CTGGTGGCAC AGATACACAC
TTAATGCTAG TTGACCTTCG TCCTAAAGGA CTAAAAGGTA ACGCCGCAGA TGCTGCTCTG
GAACGTGCTG GCATTACCTG TAACAAAAAT GGCATTCCAT TTGATACTGA GAAACCAATG
GTAACTTCAG GCATCCGTCT AGGAACACCA GCGGCAACAT CACGTGGATT TGGAATTGAA
GAATTCCAAA AAGTGGGTCA TCTTATCAGT GACGTACTTG ACGGTTTAGT TGAAATGCCA
GAAGGCAATC CAGAAGTAGA AGCTCGTGTA CTTGCAGAAG TAAGAGAGCT TTGTAAACGC
TTCCCACTTT ACCGCTAA
|
|---|
| Protein sequence | MANTEAFFSQ TLAERDPELF ATITEEQERQ ETGIELIASE NITSKAVLEA QGSVLTNKYA
EGYPHRRYYG GCEAVDVTEQ LAIDRAKKLF NCEFVNVQPH SGAQANGAVM LALLQPGDTI
MGMSLSSGGH LTHGAAPAQS GKWFNAVQYE VSPETLLIDY DAIEAQALEC KPKMIIAGGS
AIPRQIDFKR FREIADKVGA YLFVDMAHIA GLVATGVHPS PLPHAHVVTT TTHKTLRGPR
GGMILSNDLD LGKKINSAVF PGYQGGPLMH VIAGKAVAFG EALKPEFTDY IKQVVANAKA
LAEVMVERGC DIVTGGTDTH LMLVDLRPKG LKGNAADAAL ERAGITCNKN GIPFDTEKPM
VTSGIRLGTP AATSRGFGIE EFQKVGHLIS DVLDGLVEMP EGNPEVEARV LAEVRELCKR
FPLYR
|
|---|
| |