| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2265 |
|---|
| Symbol | |
|---|
| ID | 5367309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2546224 |
|---|
| End bp | 2547024 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640804613 |
|---|
| Product | TatD family hydrolase |
|---|
| Protein accession | YP_001341122 |
|---|
| Protein GI | 152996287 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.716983 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATTG ATACCCATTG CCATCTTGAT ATGCTCGATC TGGCTCCACA TAACAATGAT
ATAAACTCAG TCATTGATGC CGCGTATCGA AAGGGCGTTA GGCAGTTGCT CACTATCTCC
GTCGACCTTA ATAAAATGAA TACCGTGTTA GGATTTACTA AGCGCAACGG CGTCTATGCT
AGTTGTGGTG TTCATCCTTT GCAAAGTGAA AGCCTTGTTA CTGATGAAAC TTTACTACGT
CAGTATGCTG CCGACCCGAA AGTTATCGCA ATAGGCGAAA CGGGCTTAGA TTATTTTTAT
GAAGCATCAA CAGAGGCCCA TGAAGCTCAG AAAGTGAGTT TTATTCATCA CCTTCAAGCG
GCAGGTAGTC TGGGCCTACC CGTGATTGTT CATACTCGAA ATGCAAAAGA AGACACTCTT
TCGTTGATTA AGCAATATGG TAATCGTGAT AGCGCTGGCG TGCTGCATTG TTTTACTGAA
GATTACGATA TGGCAAAAGC CGCATTAGAA GAAAATTACT TAATTTCTAT ATCAGGCATT
GTGACCTTTA AAACGGCACA AGATCTGAAA GAAACCGTAC GCAAGCTGCC TTTAGAATCT
TTAATTGTCG AAACAGATTC ACCTTATTTA GCCCCAGTAC CATATCGGGG CAAAAAAAAT
GAGCCCCAAT ACGTTTCTGA AGTTGCTCAA TATGTGGCAG ATTTGAAAGG TATTCGTTAC
GAAGCCTTAC TAGAAGCGAC CGCGGCTAAT TTCCATCGAG TTTTTGCGAA AGCAAATCCG
CAACATCAAC TTCAGCTCTA G
|
|---|
| Protein sequence | MLIDTHCHLD MLDLAPHNND INSVIDAAYR KGVRQLLTIS VDLNKMNTVL GFTKRNGVYA
SCGVHPLQSE SLVTDETLLR QYAADPKVIA IGETGLDYFY EASTEAHEAQ KVSFIHHLQA
AGSLGLPVIV HTRNAKEDTL SLIKQYGNRD SAGVLHCFTE DYDMAKAALE ENYLISISGI
VTFKTAQDLK ETVRKLPLES LIVETDSPYL APVPYRGKKN EPQYVSEVAQ YVADLKGIRY
EALLEATAAN FHRVFAKANP QHQLQL
|
|---|
| |