Gene Mmwyl1_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_2253 
Symbol 
ID5367172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp2529061 
End bp2530698 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content38% 
IMG OID640804601 
Productdiguanylate cyclase 
Protein accessionYP_001341110 
Protein GI152996275 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.346813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.544502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTCT TGTTTTATGC TAAAACCTAC TATAAAACCG CCTTTATAAA TCAATGTAAT 
GGATCTACAG TTTTGACAGT ATTAAAAAGC AAATTCTTAA AGCTCAATCG GCTTATTTTA
TTTTTGGCCT TAACCGCTAC CACCTTAACC TTCATTAACA GCTTTTATTC GAACTACGAG
GTGCAGAAAG AGCAATTGAT TCTGCAGACA ATAGAAGTGA ATAGGGCTTA TGCCAGTAAG
CTGTCTGATA CGACAGAAGT GTTTCTGAAA TCTTCTCTGC AACAGCTAAC TTATACCGCT
AACTCATTGT TTAACAAAAT GAATGATGGC TCCCGCCTAA AAGAAGAGGC TAATCGCCTT
AAATTTCAAA CGGATAGTTT TAATTCTGTG GTCATTAGTG ATGCAAATGG TTTGACTCAA
GCTGCTTCAC CAGAAACGCT AGATTTAGTC GGAAGACGGC TTACCTCTGC CGGTAGTTTA
GAAGCTATTG AGGAAAAAAC GCTACTTATT AGTAGTCCAT ATCTTTCTAC TCTAAAGAAT
TTGATTGTTT TTCTTTCTGC TCCTGTGTTT GATTTTCAAG GAAATTATTT GGGTTTTCTC
GGTGGATCTA TCTATTTAAA AAGTCCTAAC ATTTTGAGTG AGATATTGGG TGAACATAAT
TACAAAAATG GCTCTTATAT CTATGTTATA GACCAAGACA AACAGGTCCT TTATCACCCT
GAAAAAGATC GAATTGGTTC ATTTGTCGCC GAAAATGATG GTGTTGATGA AATTGTCGCC
AAAAAAGAAG GAGGGTTGTT ACTGACCAAC AGTAGAGGGA TTGATATGTT GGCAGGTTTC
TCAACTATTC CTAGTACTGG CTGGATTGTC GTTACACAGA GTCCTTTAGA GTCCACATTA
GTGCCTTTAA CAGGTATTAT GGAAAAAGTT ATTTTACGCA CTTTGCCCAT GGCTTTAGCC
GTTTTTCTAT TTATTTGGCT ATTTGCCCGA GCCATTTCTC GACCTCTTCA ACAGTTAGCT
GATAAAGCGA GATCACTTGA TAGCCCAACT GTGAATGAAG ACATAGAAAG TATCGACTCT
TGGTACGTGG AAAGTTTAGG TCTTAAAAAA GCCATGTTGA GTGGTGTAAA GCTTATCCAT
AATCAGATTG GGGAGCTTAA GCGAGACGCC GAAACCGACC CATTGACTGG TGCAAATAAC
CGTAGAGCTT TTGAGTTTAA ACTTAAACAG TTAGCTTTGC TGGAAGTGCC GTTTAGTGTC
TTGGCCTTAG ATATTGATTA TTTTAAGCGT ATCAATGATA ACTATGGTCA TAGTGTGGGC
GATGATGTTC TTAAACAGCA AACGCAAATA TTGAACCGAT TTTGTAGAGA TGGTGACATG
GTTACCCGAA CTGGTGGTGA AGAATTTATT TTGTTATTAA AAGAAACTTC TATAGAAGAT
GCTTTCTTAG TCGCTGAACG ATTACGAATC GCGATTTCAG AAGAAACATT TGATGTAGTT
GGTAATATTA CCGTTTCAAT CGGTATAGCA GCTTGGGCAA TATCTGACGG TATTAGCATA
GAAAAAACAC TTTCATTAGC GGATAAAGCA CTTTATCAGG CTAAAGAACA AGGTAGAAAT
CGCTGCATTA TCGCATGA
 
Protein sequence
MCLLFYAKTY YKTAFINQCN GSTVLTVLKS KFLKLNRLIL FLALTATTLT FINSFYSNYE 
VQKEQLILQT IEVNRAYASK LSDTTEVFLK SSLQQLTYTA NSLFNKMNDG SRLKEEANRL
KFQTDSFNSV VISDANGLTQ AASPETLDLV GRRLTSAGSL EAIEEKTLLI SSPYLSTLKN
LIVFLSAPVF DFQGNYLGFL GGSIYLKSPN ILSEILGEHN YKNGSYIYVI DQDKQVLYHP
EKDRIGSFVA ENDGVDEIVA KKEGGLLLTN SRGIDMLAGF STIPSTGWIV VTQSPLESTL
VPLTGIMEKV ILRTLPMALA VFLFIWLFAR AISRPLQQLA DKARSLDSPT VNEDIESIDS
WYVESLGLKK AMLSGVKLIH NQIGELKRDA ETDPLTGANN RRAFEFKLKQ LALLEVPFSV
LALDIDYFKR INDNYGHSVG DDVLKQQTQI LNRFCRDGDM VTRTGGEEFI LLLKETSIED
AFLVAERLRI AISEETFDVV GNITVSIGIA AWAISDGISI EKTLSLADKA LYQAKEQGRN
RCIIA