| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2208 |
|---|
| Symbol | |
|---|
| ID | 5369244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 2485078 |
|---|
| End bp | 2485761 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640804556 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001341065 |
|---|
| Protein GI | 152996230 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.556988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGAA ACACCGCGAT TAAAGTGTCT AATTTAACCC ATACAGTGAC ATCGAATACA
GGGAATTTAA CCATATTGAA AGGAATCAAT ATGGAAATCA AGGAAAGTGA GTCCGTTGCT
ATTGTCGGTT CATCTGGCTC AGGCAAGTCC ACTTTATTAG GTTTGCTGGC CGGATTAGAT
GTGAATACAT CTGGCGATAT TTTTCTTTAT GAACAAAAGT TTTCTAGCCA AACCGAAGAA
CAAAGAGCAC TCGTTCGTGG CCAATATGTT GGTTTTGTCT TTCAATCGTT TCATCTTTTG
CCTAGCCTGC AAGCCATTGA AAATGTCATG TTACCTGCAG AACTAAAGGG TGATAAAGAA
GCACGCAAGA AAGCTGAAGT ATTACTTGAG AAAGTCGGCT TGTCGCACCG ATTAACCCAT
TATCCAAATC AACTGTCAGG CGGTGAACAA CAGCGCGTCG CCATTGCTCG AGCGTTTGCT
TCCAACCCTA AAATTCTGTT CGCCGATGAG CCTACAGGCA ACCTTGATGA AGAGAACGGT
AAACTTATTA TCAAGTTGTT GTTTGACCTT AACCAATCCC AAGGCACAAC ATTAGTGATG
GTGACTCATG ATAATGAACT TGCCAAAATG TGTGACCGTC AATTGGTCAT GTCTGCAGGT
CAGCTAACGG AAAAATCCTT ATGA
|
|---|
| Protein sequence | MARNTAIKVS NLTHTVTSNT GNLTILKGIN MEIKESESVA IVGSSGSGKS TLLGLLAGLD
VNTSGDIFLY EQKFSSQTEE QRALVRGQYV GFVFQSFHLL PSLQAIENVM LPAELKGDKE
ARKKAEVLLE KVGLSHRLTH YPNQLSGGEQ QRVAIARAFA SNPKILFADE PTGNLDEENG
KLIIKLLFDL NQSQGTTLVM VTHDNELAKM CDRQLVMSAG QLTEKSL
|
|---|
| |