Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2194 |
Symbol | tolB |
ID | 5366777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 2471713 |
End bp | 2473011 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640804539 |
Product | translocation protein TolB |
Protein accession | YP_001341051 |
Protein GI | 152996216 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.246481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.294233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTTTA AAAAATGCTT GAGTGTTTTA TTCACTTGCT TAATATTTAT AAGCTCAGCT AGAGCCCAAT TAGTTATTGA AATAACAAGT GGTGCAGATC AATTATTACC TATTGCTGTT GTGCCTTTTG GCTATGAAGG TGTGGATGCA TTGCCTGAGG ATATTGCTCA AATTGTCGAG GCTGACTTAG CCCGTAGCGG TTTATTTCAG CCAATTCCTC GCTCTAATAT GTTAAGTATG CCATCAAAAG AAGCGGATGT TTTTTATAGG GATTGGCGAC TTTTGAAAAG TGATTATGTT GTTATTGGCG CAATAAAAAA ACTACCTAAT AATCAATATC GGATTGGTTT TGAGTTATTG AATGTTTTAA GTCAGAAGCC CGTGCAAAAA CATAGCTCTA TTGATGTTAG TGCCAGAAAC TTTCGTGATG CTGCTCATTA TATTAGTGAT AAAGTTTACG AATTATTGAC AGGTACAAGA GGCGCATTTA GTACTAGAAT ATTATATGTT ACTGCAGAAG GAGATAAAAA AGCTCCACTG TTTAAATTGC AAGTTGCAGA TGCTGATGGG CATCGCCCTC AGGTTGTTGT CGAATCTAAA GAGCCAATAT TATCTCCGTC ATGGAGTATG GATGGTAGAA AAATTGCTTA TGTAATGTTT AGAAATCGAC GCCCAAATAT TTTCATTCAA GAATTAGCAA CTGGGAAGCG TCAACAGATT GCGCAATTTA GAGGGTTAAA CGGTGCACCA GCTTGGTCAC CTGATGGAAA AAAATTAGCA CTGGTTCTTT CTAAAGATAA TAATCCTGAA ATTTATACTT TAGACATCGC AACACAGAAA CTTGAGCGTA TGACAAACCA TTATGCTATA GATACCGAAC CAAGCTGGGA GCCAGATGGT AAGGGAATTG TATTCACATC TGATCGAGGC GGAAATCCGC AGATATATCG ATTAGATGTA AATAGTAAGC GTGTAGAGAG GGTTACTTTT GAAGGTGACC TAAATACCAG AGCGAGAATG ACGCCAGATG GTCGTTATCT TGTAACGGTT CAAAAGAATG ATGGTAATTA TCATATTGCG CTTCAAGATA TGAAAACTGG CCGAGTTCAA ATTCTCACAG AGACTTACTT AGATGAATCG CCAAGCATTG CGCCAAATGG TAGCATGGTG ATGTATGCCA CAACCTATCA AGGAAAGGGT ATCTTAGCCG TAGTATCCGT TGATGGGCTT GTAAAATATA GGTTACCATC AGCTGACGGA GATGTACGTG AACCATCTTG GTCCCCGTAT TTCAAATAA
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Protein sequence | MMFKKCLSVL FTCLIFISSA RAQLVIEITS GADQLLPIAV VPFGYEGVDA LPEDIAQIVE ADLARSGLFQ PIPRSNMLSM PSKEADVFYR DWRLLKSDYV VIGAIKKLPN NQYRIGFELL NVLSQKPVQK HSSIDVSARN FRDAAHYISD KVYELLTGTR GAFSTRILYV TAEGDKKAPL FKLQVADADG HRPQVVVESK EPILSPSWSM DGRKIAYVMF RNRRPNIFIQ ELATGKRQQI AQFRGLNGAP AWSPDGKKLA LVLSKDNNPE IYTLDIATQK LERMTNHYAI DTEPSWEPDG KGIVFTSDRG GNPQIYRLDV NSKRVERVTF EGDLNTRARM TPDGRYLVTV QKNDGNYHIA LQDMKTGRVQ ILTETYLDES PSIAPNGSMV MYATTYQGKG ILAVVSVDGL VKYRLPSADG DVREPSWSPY FK
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