Gene Mmwyl1_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_2160 
Symbol 
ID5366531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp2434394 
End bp2435122 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content42% 
IMG OID640804505 
Productspermine synthase 
Protein accessionYP_001341017 
Protein GI152996182 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.55651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.223021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTAC ATGACAGCGC AGATGAACTT GGCCCAATTC GCATTTTTGA TGATGGTCAA 
TACCGCATCC TATCTTTTGC TGAAGGTGAT GAGCAAAGTC GTATCCGCCT TTCTACTCCA
CATATTTTGC AGCACGAATA CACTCAAGCC ATGATGCTAC CTTTACTATT CTGTGAGCCA
AAACGAGTAT GCATCTTAGG ATTGGGCGGC GGCACTTTAC TTAACGCGCT TCACCACACG
GTTCCTGCAA TTCATATCAC AGCTGTTGAA CTACGCCAAG AAGTGCTGGA TGCGGCTGAA
ATGTATTTCA AATTACCTAG AGGCAAGCGC ATCAGCTTAG AAGTCGCCAA TGGAATTGAT
TACATGGCAG CAGGCCTAGC TAAGAAAGTC GATTTACTAA TGACTGATCT TTATAACACA
GAAGGAATGG ATCGCTCGGT TCTTCAAGCA AGCTTTATTG AAAACTGCGC GAAAAATATC
AAAGAAGATG GTTGGTTAGC TTTAAATTGC TGGATTGATC AAAAGAATAA TCATGACCTC
ACCACCGTGA TTAAGCAGCA CTTTAACGAT GTCAGAGCCT TGGATACGGG AAGTGGTAAC
TGGGTGATCA TTGCAGGCAA AAGAATGAAC AACAATAACG CCAAAGAATT AAAAGCAGCA
GCGCAAAAGC TAAGTGATAA AATGGGTTTT CAGCTAACCA AATGGCTATC CAGGTTGTCA
GAAATTTAA
 
Protein sequence
MLLHDSADEL GPIRIFDDGQ YRILSFAEGD EQSRIRLSTP HILQHEYTQA MMLPLLFCEP 
KRVCILGLGG GTLLNALHHT VPAIHITAVE LRQEVLDAAE MYFKLPRGKR ISLEVANGID
YMAAGLAKKV DLLMTDLYNT EGMDRSVLQA SFIENCAKNI KEDGWLALNC WIDQKNNHDL
TTVIKQHFND VRALDTGSGN WVIIAGKRMN NNNAKELKAA AQKLSDKMGF QLTKWLSRLS
EI