Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2140 |
Symbol | |
ID | 5365146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 2415288 |
End bp | 2416184 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640804485 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001340997 |
Protein GI | 152996162 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.747614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.186273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACTT CTTTTCCAGA AGGCATAAGA GAATTTTTAG CAGTAGTTGA AGCGCACAGT TTTTCAAAAG CCGCTGAGCA GCTCAATATT TCTCGCGCTA GAGTGTCACA AATCATCAGC CGTTTAGAAA AAGATTTAGG CGTCCAGTTA CTCTATCGAT CAACCCGCTC TCTTTCGCTG TCCCCTGCAG GAGAAACTTT TTATCAGCTT GCACGCCAAG GAGTGGATCA ACTTGAGCAT GCGGTTCTGT CAGCTCAAAA CGCTCATTCA AGCATTGGAG GTCAAATCAG AATCAATTCC GTTGGCGGTT TATTTGGCGA AGAGATACTT GCACCGATTT TGATTCGATT TATGAATGAA AACCCTAAAG TAGAAATAGA ACTTAGCTTT TCGAGCACGA GGGAAGATTT AATTGAGTCG CAATACGATC TTGTGGTCAG AATGGGCACA CTTTCTAATT CAAATTTAAT TGGACGAAAA CTAACGAGTT ACACCAACTA CTTAGTTGCT AATCCTACTT ATTTTGATAG CATGCCGAAA CTAAACAGTC CGAAAGATTT GCTTGATCAC ACGCTAATCA ACGGCTCAGT AAAAAGATGG TCTTTTACAC ACATTAGTAG CAAAGAGAAG TATGAGCTTC CGGTGCAAGG TAAACTAAAA TGCTCCAACG GACATGTCGT AAAGTTGGCA ACGCTGGAAG GAACAGGCAT CTCTAGACAA CCTTCCTATT ATGTAAAACA AGACATTCAA TCGGGTCGAC TGATAGTGCT ACTGCCAGAC TGGCAATTAC CGAACTCTGA TGTCACTTTA CTTTATCCTC AATCAAGAAA TATCAGCCTT AGGGTAAAAG CCTTAGTGCA CTACCTTATG GAAGCCTTTA ATATTAAGGC TGAATAA
|
Protein sequence | MSTSFPEGIR EFLAVVEAHS FSKAAEQLNI SRARVSQIIS RLEKDLGVQL LYRSTRSLSL SPAGETFYQL ARQGVDQLEH AVLSAQNAHS SIGGQIRINS VGGLFGEEIL APILIRFMNE NPKVEIELSF SSTREDLIES QYDLVVRMGT LSNSNLIGRK LTSYTNYLVA NPTYFDSMPK LNSPKDLLDH TLINGSVKRW SFTHISSKEK YELPVQGKLK CSNGHVVKLA TLEGTGISRQ PSYYVKQDIQ SGRLIVLLPD WQLPNSDVTL LYPQSRNISL RVKALVHYLM EAFNIKAE
|
| |