| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2139 |
|---|
| Symbol | |
|---|
| ID | 5365173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2414313 |
|---|
| End bp | 2415197 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640804484 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_001340996 |
|---|
| Protein GI | 152996161 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.207426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.170483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCGG CATTGACTAA CTCATTGGCT CCAATCTTAT TGCTTATTTG CTTGGGTTTT
TTTCTTGGTA AAAAGACAGA CTATTTAGAA AACCCATCAC TGGCCGCACT GGTTTCAAAC
TTGGGTTTGC CAGCTTTGCT ACTTTATTCT GTTTTATCGA TGCAGATGCA AATTTTCAGC
ATGCTCAAAA TTATCGCAGC GACAGCTCTA GTATTAGTTT TGATGTCGCT CATGTCATTT
GTTTTTCTCA AAGCACTCAA GTTGCCTACA CGCTTTTATC TACCGCCGTT AGTCAATCCT
AATACCGGTA ATCTCGGTAT CCCTGTTGCC TACGCATTAT TTGGTGCCGA AGGTATGGCC
ATCGCGGTTG TAATTTCGTC TGTGGTACAG ATTAGTCATT TCACCTTAGG CGTTGGCTTT
ATGTCCGGAA CCTACCATCC CAAGCAACTG TTAAAAAATG GTCCCGTTAT TGCCCTAGTG
GTTGGCGCCC TTTTCCTAAG TTTTAACATT AGCTTACCCG CGCCCTTGAT GAACACTCTG
AACATGCTCA GCCATATAAC ATTGCCTATA ATGCTAATGT TGCTTGGTAA TTCCATTAGT
GGTTTATCTG TAAAAGAAAG CAGCAAAATT GGTCGCGCTT CTCTCTTATC ACTATTTCGC
CCAGTAATAG GTGCTCTCTG TGCATGCTTG GTGGTCTATT TCTTTCCACT TAACCATTTG
GAAGGCTCTG TATTGATAGT ACTTAGCACC ATGCCTGTCG CAGTCATTAG CTATATGCTA
GCAAGCAAAT ATAAGGGACC AGTTGATGAA ATCGCTCTTA TGATTCTTTT ATCTCTACCT
CTTTCACTTT GCGCTGTTGG CTTATTGTGG TGGTTGTATC TTTGA
|
|---|
| Protein sequence | MLSALTNSLA PILLLICLGF FLGKKTDYLE NPSLAALVSN LGLPALLLYS VLSMQMQIFS
MLKIIAATAL VLVLMSLMSF VFLKALKLPT RFYLPPLVNP NTGNLGIPVA YALFGAEGMA
IAVVISSVVQ ISHFTLGVGF MSGTYHPKQL LKNGPVIALV VGALFLSFNI SLPAPLMNTL
NMLSHITLPI MLMLLGNSIS GLSVKESSKI GRASLLSLFR PVIGALCACL VVYFFPLNHL
EGSVLIVLST MPVAVISYML ASKYKGPVDE IALMILLSLP LSLCAVGLLW WLYL
|
|---|
| |