Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2092 |
Symbol | |
ID | 5368653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 2368756 |
End bp | 2369406 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640804437 |
Product | 3-isopropylmalate dehydratase, small subunit |
Protein accession | YP_001340949 |
Protein GI | 152996114 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0181351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.809899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCTT TTACTAAACA CACAGGTTTA GCCGCTCCTT TGGATTTGGC AAACGTTGAT ACGGATATGA TTATTCCAAA GCAGTTCTTG AAATCTATCA AGCGTACTGG CTTCGGTAAA AATTTATTTG ATGAACTTCG TTATGAAGAT GAAGGTCAGC CAGATCAAGA ATGCGATGGC CGCCCGTTGC GCAAAGATTT TGTACTAAAC CAAGATCGTT ACAAAGGTGC TAGCGTGTTG TTGGCTCGTC AAAACTTTGG TTGTGGATCC AGCCGTGAGC ACGCACCTTG GGCCCTAGAC GATTACGGTT TCCGTTCTAT TATTGCACCA AGCTTTGCCG ATATTTTTTA TAACAATTGT TTTAAAAATG GTTTATTGCC GATTGTTTTG CAAGCTGAAG AAGTGGATCA ATTATTCGCA GAAGTTGCAT TACGTGAAGG TGCTCAAGTA ATTGTCGATC TTGAGAACCA AACGGTTTCT TCGCCATCCG GTGCGACGTT CGAGTTTAAT GTCGATAACT TCCGTAAACA TTGTTTATTG AATGGTTTGG ACGATATTGG TTTAACACTG CAACAAGATG CTGCGATCCG TCGTTACGAA GAAAAACGAA TGAATGATGC GCCTTGGCTG TTCTTGCCTC GCGGTCAATA A
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Protein sequence | MRPFTKHTGL AAPLDLANVD TDMIIPKQFL KSIKRTGFGK NLFDELRYED EGQPDQECDG RPLRKDFVLN QDRYKGASVL LARQNFGCGS SREHAPWALD DYGFRSIIAP SFADIFYNNC FKNGLLPIVL QAEEVDQLFA EVALREGAQV IVDLENQTVS SPSGATFEFN VDNFRKHCLL NGLDDIGLTL QQDAAIRRYE EKRMNDAPWL FLPRGQ
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