Gene Mmwyl1_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_2092 
Symbol 
ID5368653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp2368756 
End bp2369406 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content42% 
IMG OID640804437 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_001340949 
Protein GI152996114 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0181351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.809899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCTT TTACTAAACA CACAGGTTTA GCCGCTCCTT TGGATTTGGC AAACGTTGAT 
ACGGATATGA TTATTCCAAA GCAGTTCTTG AAATCTATCA AGCGTACTGG CTTCGGTAAA
AATTTATTTG ATGAACTTCG TTATGAAGAT GAAGGTCAGC CAGATCAAGA ATGCGATGGC
CGCCCGTTGC GCAAAGATTT TGTACTAAAC CAAGATCGTT ACAAAGGTGC TAGCGTGTTG
TTGGCTCGTC AAAACTTTGG TTGTGGATCC AGCCGTGAGC ACGCACCTTG GGCCCTAGAC
GATTACGGTT TCCGTTCTAT TATTGCACCA AGCTTTGCCG ATATTTTTTA TAACAATTGT
TTTAAAAATG GTTTATTGCC GATTGTTTTG CAAGCTGAAG AAGTGGATCA ATTATTCGCA
GAAGTTGCAT TACGTGAAGG TGCTCAAGTA ATTGTCGATC TTGAGAACCA AACGGTTTCT
TCGCCATCCG GTGCGACGTT CGAGTTTAAT GTCGATAACT TCCGTAAACA TTGTTTATTG
AATGGTTTGG ACGATATTGG TTTAACACTG CAACAAGATG CTGCGATCCG TCGTTACGAA
GAAAAACGAA TGAATGATGC GCCTTGGCTG TTCTTGCCTC GCGGTCAATA A
 
Protein sequence
MRPFTKHTGL AAPLDLANVD TDMIIPKQFL KSIKRTGFGK NLFDELRYED EGQPDQECDG 
RPLRKDFVLN QDRYKGASVL LARQNFGCGS SREHAPWALD DYGFRSIIAP SFADIFYNNC
FKNGLLPIVL QAEEVDQLFA EVALREGAQV IVDLENQTVS SPSGATFEFN VDNFRKHCLL
NGLDDIGLTL QQDAAIRRYE EKRMNDAPWL FLPRGQ