| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2011 |
|---|
| Symbol | |
|---|
| ID | 5367197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 2276754 |
|---|
| End bp | 2278922 |
|---|
| Gene Length | 2169 bp |
|---|
| Protein Length | 722 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640804356 |
|---|
| Product | glycoside hydrolase clan GH-D |
|---|
| Protein accession | YP_001340868 |
|---|
| Protein GI | 152996033 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3345] Alpha-galactosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATG GATTGGACAT AGGGTTTTAT CGACAAGACT CAAAAGACCA AAGCAAGACC
TTGGTGATTG CTTGCCCAAA ACAAGGAGCG CCAGAATTAC TCTACTTTGG TGATGCGTTA
CCAGCGCAGA CGGATTTAGG TTCGATTTAT CTGTCGCAAC AAGCCGCTAT TCCGCAAGCC
ATGATGGACA AGCCTGTTCC TATGTCTTTA CTTCCTGAAG CAGGGCGCGG TTGGCTGCAA
ACGCCAGCCG TGGAGGCCAG TGCAGAAGAC CGCCCAACTT GGGCTGCCTG TTGGAGCTTG
CTTGATGTGG AAGCGCTAGA AAGCGGCTTT AAGATTCGTT TGGAAGATAA CGTGGCTCAA
TTGTCGGTGT CGCTGTCGAT TGGTTTATTG CCATCTGGCG TCTTACGCCA ACAACTGACC
TTAACTAACC AAGGACAGGG CGATGTGATG GTGCAGCGCT TGGCTTGTAC CTTGCCTGTT
GCTGCGCGTT TTACTGAGCG AATGGGGTTT TATGGTCGTT GGTGCCAAGA GTTTCAACAA
GAGCGCAGTG ACTGGCATGC TACTTGGTTG CAAGAAAACC GCAACGGCCG TAACTCTCAG
GCGAACTTTC CCGCGGTGAT GGTTGGTGAG CAAGGCTTTG GGGAGCAGCA AGGGGAAGTG
CTTGGGGTAC ATCTTGCTTG GAGCGGAAAC CACAGACTAA AAGCCGATTA CACCGCAGAA
GGTCATCGTT ATTTACAAGC GGAAGTCTTG TATTTATCTG GTGAAATTAT CCTCGCCGCC
AATGCGTCTA TTTCGACGCC TGAATTCTTG GCGGCGCACA GTGGCACTGG GCTAAATGCC
ATGAGTCAGC AGTTCCACCA AGAAGCGCGA GCTCGTTTGC AATTAGCTAA GCCTCGTCCA
GTGCACCTTA ATACGTGGGA AGCTTTTTAT TTCGATCATG ATATGACCAA ACTAAAAGCG
CTGGCTAAAG CCGCCGCTGA CGTTGGGGTT GAACGTTATA TTTTGGACGA TGGATGGTTT
CGCGGTCGCA ACAATGACAA AGCCGCGTTA GGGGATTGGT TTGTTGATGA AAGCAAATAC
CCAGATGGAT TAATGCCTTT GATCAGCTAT GTCAAAGAGG AACTGGGTAT GGAGTTTGGT
TTGTGGTTTG AACCTGAAAT GGTTAACCCA GATTCCGATT TATTCCGTGC TCATCCTGAT
TGGGCTTTAC AACTTCCCCA ATACAAACCC GCTCTCGCGC GTAATCAATT GGTTCTGAAT
TTAGCGAAGT CGGAAGCCTA TCAATATATC CGCGAGCGTT TATTTTCACT CTTCACAGAA
TATCCCATCG ATTATGTGAA ATGGGATATG AATCGAGATT ATTCTCAGCC AAGTGGTGAT
ATTGCACCGC AAGCTCATGC TCAAGTTGAA GCTTTGTATC GATTGTTGAG CGAGCTCAAT
CAAGCGTTTC CTGCTATGGA AATTGAAAGT TGTTCGTCTG GTGGTGCGCG AGTGGATTTT
GGTATTTTGA ATTTCACTAA ACGTTTTTGG GCATCTGACT GTAATGATGC GTTAGAGCGT
CAAACTATCC AACGTGGCTT TAGCTACTTC TTACCGCCTG AAGTGATGGG TTCTCACATT
GGTCCTGATA AGAGCCACAC TACAAGCCGT ATTCATGACG TAGCATTCCG AGCAGGCACA
GCCATGCTTG GTCATTTAGG TATTGAATGG AATTTGTTAG ACGCCAATGA CGAGCAAAAA
GCGACGATTT CGAACTGGTT GTCTCATTAC AAGCGTCATA GAGCACTGTT GCATGAAGGT
AAGAATTGGC GTTTGCCAAG CGCTGACGGT CGGGCACAAA CCCAGTGGGC ATTGAGTCAA
GACCGACTAC AAGGTTTGGC CGTTTATAGT CAATTGGCTA TGCCAAAGCA GGCGCAAACT
CTACCTGTTC GCCTACCTAA CTTATTACCA GATCAGCTCT ATCGAGTGAA CGTTTTGGAG
CATAGCCCAT TGCCAGGCCA TTTAATGAAA GCTTTACCTG AATGGTGGAA AAAAGACCTT
ATTTTAAACG GTGCGAGTTT GAGTCAAGTT GGACTCAGAT TACCTATATT TGACCCTGAA
TCTCTAGTAT TGCTAGCGAT TCAAGCCGAG CCTGAATCGG AAAATTGCGA TGGAGAATAT
AATGAATGA
|
|---|
| Protein sequence | MKNGLDIGFY RQDSKDQSKT LVIACPKQGA PELLYFGDAL PAQTDLGSIY LSQQAAIPQA
MMDKPVPMSL LPEAGRGWLQ TPAVEASAED RPTWAACWSL LDVEALESGF KIRLEDNVAQ
LSVSLSIGLL PSGVLRQQLT LTNQGQGDVM VQRLACTLPV AARFTERMGF YGRWCQEFQQ
ERSDWHATWL QENRNGRNSQ ANFPAVMVGE QGFGEQQGEV LGVHLAWSGN HRLKADYTAE
GHRYLQAEVL YLSGEIILAA NASISTPEFL AAHSGTGLNA MSQQFHQEAR ARLQLAKPRP
VHLNTWEAFY FDHDMTKLKA LAKAAADVGV ERYILDDGWF RGRNNDKAAL GDWFVDESKY
PDGLMPLISY VKEELGMEFG LWFEPEMVNP DSDLFRAHPD WALQLPQYKP ALARNQLVLN
LAKSEAYQYI RERLFSLFTE YPIDYVKWDM NRDYSQPSGD IAPQAHAQVE ALYRLLSELN
QAFPAMEIES CSSGGARVDF GILNFTKRFW ASDCNDALER QTIQRGFSYF LPPEVMGSHI
GPDKSHTTSR IHDVAFRAGT AMLGHLGIEW NLLDANDEQK ATISNWLSHY KRHRALLHEG
KNWRLPSADG RAQTQWALSQ DRLQGLAVYS QLAMPKQAQT LPVRLPNLLP DQLYRVNVLE
HSPLPGHLMK ALPEWWKKDL ILNGASLSQV GLRLPIFDPE SLVLLAIQAE PESENCDGEY
NE
|
|---|
| |