| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2006 |
|---|
| Symbol | |
|---|
| ID | 5366699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 2271934 |
|---|
| End bp | 2272881 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640804351 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001340863 |
|---|
| Protein GI | 152996028 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTA ACGATATCTA CTATTTTTAT CTGACCGCTG AACATGGCGG CTACACGGCT
GCCGAGCGAG TGTCAGGTAT TACCAAATCT CTGTTGAGTC GACGAGTTGC TCAATTGGAA
GAGCGCTTAG GTATTCAATT GATACACCGT AATAGTCGAC AATTTTCTCT AACGGATGCT
GGTGTGCAAT TGTATGAAGG CGCCATTAAT ATGGTGGCTG AAGGGCAGTC TGCATACGAG
TCTGTGGCTT TATTGCAATC GGTTCCTTCC GGTGTCGTGC GTGTCAGTTG TCCTGTGCTA
TTAGCTCAGC ACCATTTCAC ATTTTTTCTG CCAGAGTTTA TGAAAAGTTT CCCTCAGGTC
TCTGTTCATT TGGATGTGAC CGATAGGGAG GTTCAAATTC TAGAAGAGCG AGTGGATATT
GTGTTGCGTA CTCGTGGCGA TTTAGCCCAA GAGGCGGGTA TCGTTTCAAA AAAATTGGCA
ACGAGCAAAA TGATTTTGGT GGCAAGTCCT GATTTTATTA AAGAATATGG AATGCCAACA
CACCCAAGCC AACTAACCAA AATGCCGACT TTGACAGAAA TGGCAGGCAA GCAAGATGGT
ACACTTTATC AATGGGAGCT ACTTGGTCCT GATGGTGCCG TGTGTTCGGT GCCGCATCAT
CCTAGGTTAG TGTGTTTAAA TCGCTGGCTG CAACTGAAGT CGGCTGTTCA AGGTGTTGGA
GTGGGGCTGA TACCAGAAAT AGTGGCTAGT GACGATCTAG CGAAAGGAAA CTTATTACAC
GTTTTACCTA GTTGGACGAC CAATGTCAGT ATTGTCCAAG CCGTTTATTC GTATCGAAAA
AGTATGACTC CCGCGGTGCG CGTTTTCTTG GACAGTTTGC TGCATTATTT TGCACAGGAC
GTAAATGTGA ATCGCGAAAT TCAAACGAAA CAGCTTACAT CCATATAA
|
|---|
| Protein sequence | MDFNDIYYFY LTAEHGGYTA AERVSGITKS LLSRRVAQLE ERLGIQLIHR NSRQFSLTDA
GVQLYEGAIN MVAEGQSAYE SVALLQSVPS GVVRVSCPVL LAQHHFTFFL PEFMKSFPQV
SVHLDVTDRE VQILEERVDI VLRTRGDLAQ EAGIVSKKLA TSKMILVASP DFIKEYGMPT
HPSQLTKMPT LTEMAGKQDG TLYQWELLGP DGAVCSVPHH PRLVCLNRWL QLKSAVQGVG
VGLIPEIVAS DDLAKGNLLH VLPSWTTNVS IVQAVYSYRK SMTPAVRVFL DSLLHYFAQD
VNVNREIQTK QLTSI
|
|---|
| |