| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2001 |
|---|
| Symbol | |
|---|
| ID | 5365847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2265729 |
|---|
| End bp | 2266655 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640804346 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001340858 |
|---|
| Protein GI | 152996023 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAA CATTCCGACA AATTGAAATA TTCAATGCTT TGATGACAGC AGAAAGCGTA
ACCAGCGCCG CCGATATGTT GCATACCTCA CAACCAACCA TTAGCCGAGA ATTGGCCAGA
CTTGAACAGG TATTAGGGTT CAGCCTATTC GAACGAGTGC GCGGCCGACT CAAACCCAGT
AACGCCGCTT ACACGCTTTT TGAAGAAGTA AAACGTTCGT ATATTGGCTT AGAACGAATT
TGGTCAACCG TTGAAGATTT ACGCACAGAT CAGATAGGAA GACTCTCAGT ACTAACATTG
CCAGCTTTTT CCCAGTCTTT ATTACCAGGC GCTTGTCTCA AATTTTTAGA TATTCACCAG
AGGGTTGGGG TTTCTATTGC GGTTCAAGAA TCACCATTTT TAGAGCAAAG TTTATCCTAC
CAGCAATACG ATCTTGGTTT GACCGAAAAT AACGACACGC CTTCCGGTAC CACACTTAAG
CCTTTACTTA GTGTTGATGA GGTGTGCATT TTGCCAAATG ACCATCCACT ATTAGCAAAA
GACATCATTG ATATCCGTGA CTTTGAGGGA CAAGCTTTTA TAAATTTATC ACCCACTGAT
CCTTATCGAA TAAAGCTGGA TCAGGAACTA TATCGGCTTG GTATCAATCG TAAAACCGTG
ATAGAAACAC CAACTGCCGC GTCTGTCTGT CAGCTAGTAA GTAAAGGCGC GGGAATTGCC
ATCATCAATC CACTAACAGC ATTAGACTTT ATTGATCATG GTCTGCAAAT TCGGCCATTG
AATGTGTCTT ACCCATTTAC CATCAATATA CTTTTGCCCC TGCACCGCCC TTTTAATCCT
CACTTAGACG ATTTCATTAC GGCTCTGGAA GCAGAAGCAA AAGAAATAAA AACTAAAATC
AGTCAATACA CGCACGATTC GAGGTAA
|
|---|
| Protein sequence | MKLTFRQIEI FNALMTAESV TSAADMLHTS QPTISRELAR LEQVLGFSLF ERVRGRLKPS
NAAYTLFEEV KRSYIGLERI WSTVEDLRTD QIGRLSVLTL PAFSQSLLPG ACLKFLDIHQ
RVGVSIAVQE SPFLEQSLSY QQYDLGLTEN NDTPSGTTLK PLLSVDEVCI LPNDHPLLAK
DIIDIRDFEG QAFINLSPTD PYRIKLDQEL YRLGINRKTV IETPTAASVC QLVSKGAGIA
IINPLTALDF IDHGLQIRPL NVSYPFTINI LLPLHRPFNP HLDDFITALE AEAKEIKTKI
SQYTHDSR
|
|---|
| |