| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1928 |
|---|
| Symbol | |
|---|
| ID | 5368807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 2188934 |
|---|
| End bp | 2190031 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640804275 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_001340787 |
|---|
| Protein GI | 152995952 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.851461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTTCAT CGATAAAAAA AATCATAGGT AAACTATTAG ATATCGGCTT TGAGGATGAG
TTTGGAAATG ACCTCAATCA GAAACATGTC GTGAATTTTT CCTACATGAT GTTCTGTATA
AGCTGTTTAT TCATGCTTAT TGTATTCTCT TTGCGTCAAA TGTCCTCGGT CGCTATTTTT
TCTTTGATCG GTTTATTAAT CGGTGTGATT GGTTTGCGTT ACAGCTATAT CGGGTATTTT
TCTCGTGCTC AATTATTAAT GCCCATTCTT CAAATCTCTC AAATATCCAT TCTTAGCTTG
TTTTACTTCG GCACTAATAG TGGTTTTCAT TGGCTGTTCG TCAGTGTCAT TGCTTATTCC
TTTGTTGTCT TCAGAGTAGA TCAAAATTTT GCCAAGTACT GGATAGTTAG CATTTCTATT
GTTTTATTTT TGATGTGTGA GCTTTTAAAC ACGCGAGGAA TTTACCTTAC TTCGTTTGAT
CAAAGTGTGG TGGTTGTTTT TGTGTTTCTT GCACTTTCGT TCAATTTCGC TATGGTCATT
AATCTTGTAA TAAAACGACT GAAGTCGGTG AATAGTCACT TGCGAACCTT GGCTGAAATG
GATGAGCTTA CAGGGCTTTC AAACCGAAGA AAGGTCTTGG CGGATGCTGT TAATATTTTT
GCAGATTCTG TTATCAATAG AGAGTCATGT GTATTTGCTA TTGTTGATTT GGATCATTTT
AAAAAGATCA ATGATACTTT TGGGCACGAA GCGGGCGATT TGGTTTTGGC AAAAGTATCA
GCCATGATGG CGTCTGTTAT AAGGTCTCAA GATGAAATAG GTCGTTATGG TGGTGAAGAA
TTTATTGTTA TCATGCCGGA CACTTCTTTA AAAGACGCAG AGGTTGTTAT GGAGCGCATG
AGGCAATCGG TCGAAAATAT GCTAATAGAA ACCGAGCATG GTATTGTTAT CCCGGTTACT
GTCAGTATCG GTGTCGCTGC CATTGCACCA AGTGTTTCAC GCTATGAAGA AATATTGGCG
CAAGCGGATA AAGGCTTGTA TACAGCTAAG CGTAACGGCC GAAATCGAGT TTCTGTACAA
TCAGACTATC AAAGTTAG
|
|---|
| Protein sequence | MFSSIKKIIG KLLDIGFEDE FGNDLNQKHV VNFSYMMFCI SCLFMLIVFS LRQMSSVAIF
SLIGLLIGVI GLRYSYIGYF SRAQLLMPIL QISQISILSL FYFGTNSGFH WLFVSVIAYS
FVVFRVDQNF AKYWIVSISI VLFLMCELLN TRGIYLTSFD QSVVVVFVFL ALSFNFAMVI
NLVIKRLKSV NSHLRTLAEM DELTGLSNRR KVLADAVNIF ADSVINRESC VFAIVDLDHF
KKINDTFGHE AGDLVLAKVS AMMASVIRSQ DEIGRYGGEE FIVIMPDTSL KDAEVVMERM
RQSVENMLIE TEHGIVIPVT VSIGVAAIAP SVSRYEEILA QADKGLYTAK RNGRNRVSVQ
SDYQS
|
|---|
| |