| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1909 |
|---|
| Symbol | |
|---|
| ID | 5366429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2166860 |
|---|
| End bp | 2168383 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640804256 |
|---|
| Product | amino acid carrier protein |
|---|
| Protein accession | YP_001340768 |
|---|
| Protein GI | 152995933 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1115] Na+/alanine symporter |
|---|
| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.5793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.618767 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCAT TCATTGATTT CTTAAACGGA GTCATTTGGA GCCCTGCCCT AATTTATCTA
TGTTTAGGCG CGGGCTTGTT TTATTCAATA CTGACACGTT TTGCTCAAGT TCGTCATTTC
AAAGAAATGT GTTCACTTTT GTTCAATTCC AACGATTCGG ACAAAGGCAT TTCTTCTTTC
CAAGCACTCG CGGTATCGCT ATCTGGTCGT GTTGGTACAG GTAACATTGC AGGTGTTGCT
GCGGCCATTG GTTTTGGTGG CCCAGGCGCA ATTTTTTGGA TGTGGGTCGT TGCTTTCTTA
GGCGCAAGCA CGGCTTACGC AGAATCCACT TTAGGTCAGC TTTATAAAGT CAGCGAAGGT
GGTCAATATC GTGGTGGCCC AGCTTATTAT TTCGAGCGCT GCCTAGGCTG GCGTTGGTTA
GGCGTATTGT TTGCTTTATC TTCTATTATT GCCTGTGGTG TTTTCTTACC AGGTATTCAA
GCAAACTCTG TAGGTAACGC TGTTGTACAA ATCTTCGGTG AAGGCACTGT TGTATCAAGC
TCTTTTGGTG AAGTAGGTTC AACTAAATTA GTTGCCTTAG CTGTTATCTT GGTTGTCTTG
GCATTCATCA TCTTTGGTGG CATCAAACGT ATCGCTAACT TTACTCAAAT CATCGTGCCA
TTCATGGCGC TTGGTTACAT TGTGATGGCG TTGATCGTTG TTTTCCTAAA CCTAGATAAA
GTACCAAGTA TTTTCGGCTT AATCTTCTCT GATGCATTTA CTGCCCAAGC AGGTTTTGGC
GCAGCAATTG GCTGGGGGGT AAAACGCGGT GTTTACTCTA ATGAAGCCGG TCAAGGTACT
GGACCTCATG CAGCCGCTGC AGCAGAAGTT CAACACCCTG CACAACAAGG TCTTGTTCAA
GCTTTCTCTG TTTACGTTGA TACTCTATTC ATCTGTACAG CTACCGCTCT GATGATTTTG
ATCACGCAAC AATACAACGT ACAAGGTTCT TTGCCTGACG GTCAATTCAT CGTACAAAAC
GTTGATCCTT CTACTATCAT TGCGTCTCCA GCCTTCACTC AAATGGCACT GGCAAGCGTA
TTTGGTAGTT CTGGCCCAAT CTTTGTAGGC ATAGCATTGT TCTTCTTCGC ATTCACAACA
ATTCTGGCGT ATTACTACAT TGCTGAAACT AACGTAGCCT ACCTGCGTCG CGCATTGAAA
ATCAACGTAT CACTAACCTT CGTAAAACTG CTTATCATGT TCATGGTAGC TTACGGTACA
GTTAATACTG CAGGTTACAT CTGGAACCTA GGTGACGTTG GCGTAGGCTT AATGGCTTGG
TTAAACATCG TTGGTATCAT CACCATCTTC TTCATGGCAA AACCAACCAT GAAAGCATTG
CGTGATTACG AAGATCAAAA AGCATCTGGT GTAACCGACT ACACTTTTAA CCCTAAAGCC
CTTGGTATCA AAGGGGCAGA ATTCTGGGAA AAACGTTACG ACAAACAACA AGCTGAAAAA
GCAGCCGACA ATAATAGTCA TTAA
|
|---|
| Protein sequence | MQAFIDFLNG VIWSPALIYL CLGAGLFYSI LTRFAQVRHF KEMCSLLFNS NDSDKGISSF
QALAVSLSGR VGTGNIAGVA AAIGFGGPGA IFWMWVVAFL GASTAYAEST LGQLYKVSEG
GQYRGGPAYY FERCLGWRWL GVLFALSSII ACGVFLPGIQ ANSVGNAVVQ IFGEGTVVSS
SFGEVGSTKL VALAVILVVL AFIIFGGIKR IANFTQIIVP FMALGYIVMA LIVVFLNLDK
VPSIFGLIFS DAFTAQAGFG AAIGWGVKRG VYSNEAGQGT GPHAAAAAEV QHPAQQGLVQ
AFSVYVDTLF ICTATALMIL ITQQYNVQGS LPDGQFIVQN VDPSTIIASP AFTQMALASV
FGSSGPIFVG IALFFFAFTT ILAYYYIAET NVAYLRRALK INVSLTFVKL LIMFMVAYGT
VNTAGYIWNL GDVGVGLMAW LNIVGIITIF FMAKPTMKAL RDYEDQKASG VTDYTFNPKA
LGIKGAEFWE KRYDKQQAEK AADNNSH
|
|---|
| |