| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1879 |
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| Symbol | |
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| ID | 5366280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 2127579 |
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| End bp | 2129339 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640804226 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001340738 |
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| Protein GI | 152995903 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.781253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAGCA AATATTTTTG GGCCGGTTTT GGCTGCATTA GTATAATTTT CCACTTAACG
CTGATTTTCT CAGGCTTGGT TCCCAATTTG GTCAGCCGAC CACTTCATAT GGCGCTTGCG
TTACCTTGGG CGTTTATTTT CTTAAGTAAC ACAGCTTTCC AACGTTATAC GGGCTACTTA
TTTACTGTAC TTGGTTTAAT TGCCACCTTT TGGGTTGCCA TTAATGCCGA TATATTGATT
GATCAATACG GCTATATTGG TGAAAGCTAC CAATTGTGGA TTGCTGGCAT TTTACTGCTT
AGCGTTTTAG AAATGGCAAG ACGTTGCATC GGCTGGCCCT TACCATTAGT AGCAGCAATT
GCTCTTTGTT ACGGTATGTT TGGGCAATAT ATTCCGGGAG AATTTGGTCA CCCAGGAACG
CCAATAGGCA GCTTCTTAGG CACCTTAACC ATTGCTGAAG GCGGAATTTG GGGGAAACTT
ACCGGCGTAT CCGTGAGTAT TGTCGCCATA TTTGTTATCT TTGGTGCGGT GCTCAATGCA
GGAGAGGCAG GAGAAGGCTT TATGAACCTC GCGATGGCCG CAGCGGGAAG ACTTCGTGGA
GGAGCAGCCA AAGTGTCGGT TATTTCCTCA GCGCTGTTCG GTTCTATTTC AGGTTCTGCC
TCGGCTAACG TAGCCTCTAC TGGTGCGATC ACCTTACCTG CCATGACCAA GCTTGGTTAT
CCTAAATCTC TCGCAGGAGC GACGGAAGCA GTTGCCTCTT CTGGTGGGCA AATTATGCCC
CCTTTAATGG GTGCTGGAGC TTTTGTCATG GTTGAACTCA CAGGCATTTC CTACCAAAGT
ATTATGATGG CCGCTATCTT GCCCGCTATA TTATATTTTT GGGCTGTCTG GGTTGGTATC
GATGCCTTTG CATTACGTTA CGATCTAAAA GCCGTCAATA AAGACCAACA ACCAAGCCGA
CAGCAACTAC TTATTACCTG TAGCTTCTTC ATGATCCCAT TTGCAATTTT GCTTTGGGGT
ATGTTTGGAC CCGCTTTTAC ACCGCAATTT TCAGCAAGCA TTGCCATCTT TGGTGCGGCA
ATTTTGCTCT TCTTTAACTC AAAAGGTTTA TCAAATAAGA AACAGGTTTT TGAGCGTTTA
GAAGATGTCT GCATTAATGC TGGCAAACAA ATAGCCATGA TAGCCGCAAT CATCTTATGC
GCGTCTATTG TGATTGGCGT CTTATCAATT ACTGGATTAG GCGTAAAAAT CACCTCCCTT
ATTATTTCAG GGGCATCGGG GATGTTATGG CCAGCGATCA TATTGACAGC AATCGCCTGT
CTGATTTTAG GTATGGAAGT ACCGACTACA GCGGCTTATG TAATCTGCAT TTCAGTCGCA
GGTCCTGCCT TAGCTCAACT TGGCCTTTCT CTACTACAAG CGCATTTATT TGTATTCTGG
TTTGCTCTAC TTTCAACCAT TACACCACCC GTTTGTGGAA GTGTATTTAT TGCAGCTGGC
ATGGTGAAAG AAAACTGGTT AAAAGTAGCA GGAGTCTCCA TGATGCTGGG GGTCGGCCTG
TATTTAATTC CACTAGCCAT GATTGCTAAT CCGTCATTAA TCCAATTAGG TACAAGCCCG
TTACTTGCCA TTGCAAGTGC CTTGAAAATC GCGCTCGCAC TGTATTGCAT TTCAATGGCT
TTGATTGCAC CATATAAATT AATAAAACGC GCACTGTATC TGTCTATTGG ACTAATATTA
ATTTTTGCGT TTTCTATCTA G
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| Protein sequence | MPSKYFWAGF GCISIIFHLT LIFSGLVPNL VSRPLHMALA LPWAFIFLSN TAFQRYTGYL
FTVLGLIATF WVAINADILI DQYGYIGESY QLWIAGILLL SVLEMARRCI GWPLPLVAAI
ALCYGMFGQY IPGEFGHPGT PIGSFLGTLT IAEGGIWGKL TGVSVSIVAI FVIFGAVLNA
GEAGEGFMNL AMAAAGRLRG GAAKVSVISS ALFGSISGSA SANVASTGAI TLPAMTKLGY
PKSLAGATEA VASSGGQIMP PLMGAGAFVM VELTGISYQS IMMAAILPAI LYFWAVWVGI
DAFALRYDLK AVNKDQQPSR QQLLITCSFF MIPFAILLWG MFGPAFTPQF SASIAIFGAA
ILLFFNSKGL SNKKQVFERL EDVCINAGKQ IAMIAAIILC ASIVIGVLSI TGLGVKITSL
IISGASGMLW PAIILTAIAC LILGMEVPTT AAYVICISVA GPALAQLGLS LLQAHLFVFW
FALLSTITPP VCGSVFIAAG MVKENWLKVA GVSMMLGVGL YLIPLAMIAN PSLIQLGTSP
LLAIASALKI ALALYCISMA LIAPYKLIKR ALYLSIGLIL IFAFSI
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