| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1871 |
|---|
| Symbol | |
|---|
| ID | 5366627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 2119738 |
|---|
| End bp | 2120682 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640804218 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001340730 |
|---|
| Protein GI | 152995895 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA AAACCTTCTT GAAATCTTGC CTTGCCGCAA CATTATTGAC CTTGGCTAGC
ACCAGCGTTT TAGCTAGCAA TGGTTTGATC GCCATCATTA CTCCATCTCA TGACAATCCA
TTTTTTAAAG CCGGTGCCGA AGGCGCGGAT GCGAAAGCAA AAGAATTGGG TTATGACACC
TTGGTTGCTT CTCATGACGG TGATGTAAAT AAACAAAACC AATTGATTGA AACAGCGATT
GCTCGTCAAG CCAAAGCGGT TATTTTGGAT AATGCTGATG CAGACGCAAG TATTGGTTCA
CTAGAGCGTT TGAAAAAAGC CGGCATCCCA GCTTTCCTAT ACGACCGTGA AATCAATAAA
ACCGGTATTG CTGTAACTCA AATCGTATCG AATAACTTCC AAGGTGCTCA ATTAGCTGGT
GAAAAATTCG CCGAGTTGAT GGGTGATGGT GGTGAATACG TTGAGCTATT AGGACCTGAA
TCAGACACCA ATGCGCAAGT GCGTAGTGAA GGTTTTCACG ACATTCTTGA TAACTTCCCT
GAATTCAAAA TGGTTGCTCG TCAGTCTGCC AACTGGAGCC AAACCGAAGC GTTCAGCCGT
ATGGAGTCGA TCTTACAAGC GAATCCAAAC ATCAAAGGTG TGATTACGGG TAACGATTCT
ATGGCGTTGG GTGCAGAAGC TGCATTGCAG GCTGCAGGTC GTAAAGACGT CTTCATCGTA
GGTTTTGATG GTCTTGATTA CGTAAGAGAT TCCATCATTA AAGGTTCTAA CATCAAAGCA
ACCATCATGC AGCCAGCATA CGCTCAAGCT CAACGCGTTG CTGAACAAGC AGATCTATAC
ATTCGTACCG GCTCAACAGG ATTGCCAGAA AAACAACTAA TGGATTGTGT ATTGATTGAT
AGTTCTAATG CGAAAAATCT AAGTAACTTC GCGCTAAAAA AATAA
|
|---|
| Protein sequence | MKKKTFLKSC LAATLLTLAS TSVLASNGLI AIITPSHDNP FFKAGAEGAD AKAKELGYDT
LVASHDGDVN KQNQLIETAI ARQAKAVILD NADADASIGS LERLKKAGIP AFLYDREINK
TGIAVTQIVS NNFQGAQLAG EKFAELMGDG GEYVELLGPE SDTNAQVRSE GFHDILDNFP
EFKMVARQSA NWSQTEAFSR MESILQANPN IKGVITGNDS MALGAEAALQ AAGRKDVFIV
GFDGLDYVRD SIIKGSNIKA TIMQPAYAQA QRVAEQADLY IRTGSTGLPE KQLMDCVLID
SSNAKNLSNF ALKK
|
|---|
| |