| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1865 |
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| Symbol | xylF |
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| ID | 5366373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 2111610 |
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| End bp | 2112611 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640804212 |
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| Product | D-xylose transporter subunit XylF |
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| Protein accession | YP_001340724 |
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| Protein GI | 152995889 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.30323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TCCTTTCCAT GAGTTTGCTG GCAACACTCT GTGCAGCAAC ATCTCTTCCT
GCATTGGCGG CAGGTGAGAA AATCGGTTTG TTGATGTCTG ACTTACGTTT AGAGCGCTGG
CAGAAAGACC GAGATTTGTT TACGGAAGCG GCTGAATCTA TGGGCGCTAA GGTTTACACA
CAATCAGCCA ATGGCGATGC GAACACACAA ATCTCTCAAA TTGAAAACAT GATTTCTCGT
GGAGTTGATG TGTTGGTTAT TGTGCCAGAA AACGGTGAAG TACTCGGTAA TGTGTTGGCA
GAAGCCAAAG CCGAAGGTAT TAAAGTACTG GCCTACGACC GATTGATTAA ATTCGCTGAC
ATCGATTTAT ATGTGTCTTT TGACAATATT CGTGTGGGTG AAATGCAGGC CGAAGCTTTA
CTGAAGCGTA AACCGAAAGG TAATTATTTT TTGATGGGAG GGTCGCCAAC AGATAACAAC
GCGAAAATGT TCCGCCAAGG TCAAATGAAC GTACTGCAAC CTGCGATTGA TGCTAAAAAA
ATTAACATAG TAGGCGATCA ATGGGCAATG GGTTGGTCTG CTGAGGCTGC GTTAAATATT
ATGGAAAATG GTCTTACTGC CAATGCTAAT AAAATTGATG CGGTTGTAGC GTCTAACGAT
TCTACCGCTG GTGGTGCGAT CCAAGCACTA GCTGCACAAG GTTTGAGTGG TAAAGTGGTG
ATCTCTGGTC AAGATGCTGA TTTAGCATCG GTACGTCGTA TTGTCGCTGG CACACAGACT
ATGACGGTGT ACAAACCGAT TTCGAAACTG GCAAAAACCA GTGCGGAAAT GGCGGTTAAG
CTAGCTCGTG GTGAAAAAAT CAAAGTTAAT GGCTCGGTTA ACAACGGCAA AAAAGACGTT
GATGCTGTGT TGTTAACGCC TATTTCGGTT ACCAAAGACA ACCTAGATTC AACCGTCATT
GCTGACGGAT TCCATTCTCG TAATGATGTT TACAATCCTT AG
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| Protein sequence | MKKILSMSLL ATLCAATSLP ALAAGEKIGL LMSDLRLERW QKDRDLFTEA AESMGAKVYT
QSANGDANTQ ISQIENMISR GVDVLVIVPE NGEVLGNVLA EAKAEGIKVL AYDRLIKFAD
IDLYVSFDNI RVGEMQAEAL LKRKPKGNYF LMGGSPTDNN AKMFRQGQMN VLQPAIDAKK
INIVGDQWAM GWSAEAALNI MENGLTANAN KIDAVVASND STAGGAIQAL AAQGLSGKVV
ISGQDADLAS VRRIVAGTQT MTVYKPISKL AKTSAEMAVK LARGEKIKVN GSVNNGKKDV
DAVLLTPISV TKDNLDSTVI ADGFHSRNDV YNP
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