| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1852 |
|---|
| Symbol | |
|---|
| ID | 5367731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2079916 |
|---|
| End bp | 2080767 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640804193 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001340711 |
|---|
| Protein GI | 152995876 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.323758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00188787 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTAACA TAATAGCTTG TATCGATGGT TCTTCTCTAT CTGAGTGTGT CACCACCGCA
TCCGTGTGGG CGGCCAAGCA AATGGGCTCG CCATTAATCT TGATGCACTC TTTGGAAAAA
GAAGCTGTGA GAACCGACGA AGATCTTTCT GGTTCAATCG GCTTAGGCAG CCGAGAGCAC
CTGCTAGAAG AGCTTGTTGC CCTGGATGCT AAACGCGCTA AATTAGCCTT AGAGCATGGC
AAGCTGGTGC TCGAAAACGC CAAAGAATTT GCTCATAAGG CTGGCGCCAA GCAAATCGAA
TTGCTGCAGC GTCATGGCGA TTTAGTCGAC AACCTCCTCG ACCTTGAGGA AGAATCTCGG
CTTATCGTCT TGGGTCGTTG TGGCAGCGGT CATACGCAAA GTGCTCACAC CATTGGCTCT
CACATTGAGC GAGTCGCTCG CACATTGCAT CGTCCAATCT TAATCAGCGT CGGCAAATTT
AAAGCGCCAA CAAACTTTAT GATTGCTTAC GATGGTCGTG AAGCTGCAGA TAATGCGATC
GCACGTATCG CGCAAAGCCC GTTACTGCTT GGCCTACCTT GCCATCTCGT CATGGCAGGA
GAAGCGACAC CTGAGCGCAG AGCAAAATTA GAAGAAGCTC ATCAACGTTT GGAAGAAGAA
GGTTTTGACG TCACGGCATC TATCATTCCA GGAAAGATCT ATCCAGTGCT GACTCAATAC
CGTGAAGAGA ACCAAATCGA ACTCATGGCA ATGGGCGCGT ATGCCCACTC TAAAGTTCAT
CAATTCTTTG TTGGCAGCAA CACCAGCAAG ATGATAATTG AGAGCGATAT TCCACTTTTG
ATTTTGCGTT AG
|
|---|
| Protein sequence | MTNIIACIDG SSLSECVTTA SVWAAKQMGS PLILMHSLEK EAVRTDEDLS GSIGLGSREH
LLEELVALDA KRAKLALEHG KLVLENAKEF AHKAGAKQIE LLQRHGDLVD NLLDLEEESR
LIVLGRCGSG HTQSAHTIGS HIERVARTLH RPILISVGKF KAPTNFMIAY DGREAADNAI
ARIAQSPLLL GLPCHLVMAG EATPERRAKL EEAHQRLEEE GFDVTASIIP GKIYPVLTQY
REENQIELMA MGAYAHSKVH QFFVGSNTSK MIIESDIPLL ILR
|
|---|
| |