| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1766 |
|---|
| Symbol | |
|---|
| ID | 5366396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 1996459 |
|---|
| End bp | 1996812 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640804109 |
|---|
| Product | HopJ type III effector protein |
|---|
| Protein accession | YP_001340627 |
|---|
| Protein GI | 152995792 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.796193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAGTA CTCAAACGCT CATAGAAAAA ATCAAGAGCA CACCTGAGCA AGTACAATTT
AAAGAAGTGA TTGATGTGAT TGAGCGTGAA TACGATTTCA CGCCTGCCGC GTTTTCTAAT
GGCAAACAAA CCAATGGCAT TAATGAAAAC AATGGTTCTT GTAAGATTTT TTCTTTCGGA
TCTATTCACC AACTAACAGA AGTCGAAACC CTAAATTTGT TTGGTGACTT TTACCGTGTT
GATGTTTTAG AAAACCCAGA AGCGACAGAT CACCAAAACA TTCGCCAATT CATTGACAAT
GGCTGGAGTG GTATTACTTT CGAAACTGTC GCGTTGACTC AAAAGAACAT GTAA
|
|---|
| Protein sequence | MLSTQTLIEK IKSTPEQVQF KEVIDVIERE YDFTPAAFSN GKQTNGINEN NGSCKIFSFG
SIHQLTEVET LNLFGDFYRV DVLENPEATD HQNIRQFIDN GWSGITFETV ALTQKNM
|
|---|
| |