| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1757 |
|---|
| Symbol | |
|---|
| ID | 5365313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1983920 |
|---|
| End bp | 1985134 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640804100 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001340618 |
|---|
| Protein GI | 152995783 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGT CAGGTAGTAC TTCTGAACAA AGCCGCATTT ATAATGAGCG TATTATTCTT
CATTTAGTTC GACAGCACCC CGAAATTTCC CGAGTGAAGA TTGCTGAGCA AACGGGGCTG
AGTGCTCAGA CGATTTCCGT GATCACGTCA TCTTTGCTTG AGAGACAGTT GCTACAAGTC
GACGGCAAAG TAAAAGGCCG TCGTGGTCAG CCTTCAATAA AACTTAGTAT CAACAAAAAA
GGCGCTTATG GCTTAGGTAT TAATGTTGAT CGCGACCATA TCAGTGCTGC TTTGCTAGAT
TTTAGTGGCG AATGTGTTTT GTTGTTAGAA CGAATAGTGT CTTTTCCCAC CGAAAATTTA
GCGAAGAAAA TCGCTCAAGA TCTAATTGAA GAAGTGAAAA CAACGTTAGG TGAAGACTGG
AGCAAGGTTC AAGGAATTGG TCTGGCAAGA CCTGACTATA TGGATTCTTG GCTAGAAACC
TTGGTGACGG ACTCTGACCA AAGAGCGGAT TTGAGCAATC TAAAAGCCGC CTTGGCTTAT
TGGCAATCGG ATGCGTTTGA ATCTTGGCTG ACGGATTTAA CCGGCGTGCC ATGTTTCTGC
GAAAACGACG CTGTTGCCGC GGCGACCAGT GAGTTGTTAC TGGCGTCTGT TGCACCACAG
CGTGACTTCT TTTACCTCTT CGTCAGTACT GCTTGCGGTG GTAGTTTTGT AGCCAATGGT
GAGTGTTACT TTGGTGCTCA TGGAAAAGCC GGTAGCTTTG GTTTAATTCC TACCGCAACA
GGAAAGCATG GCAAATGGAT TCTTGAAGCC TTGTCACTGT CTTCGTTGCG GCGTTTCTTT
GCTGATAAGC AAATTCCGTG GCCTTCGACT GATGATCTGT GGCTTGAACC TCAATACACT
ACACTTATCG AACAATGGGC GAGCGAGGTG GCCTTCGAAG TGACTCCAGC TTTGGCCTCG
GTGGTTGCTT TATATGATCC AGAGGCGATA TTGATTGGTG GGCGTTTGCC ATCGCCAGTA
TTAGCAGCAT TAATTATTTG TATCGAAAAT AGGTTAACCG CACACAGTAT GCTGCCTTTG
CCTGTGATTC GTATTGCTCA AACAGGTCAT ACCGCCGGTG TTTTGGGGGC GGCAGTGTTG
CCTTTGTATG GAAGCTTTGC ACCACAGCAA AACCTATTAT TGCTAAGTTC TAAATCCGCA
GTTTCAGCCT CTTAA
|
|---|
| Protein sequence | MKSSGSTSEQ SRIYNERIIL HLVRQHPEIS RVKIAEQTGL SAQTISVITS SLLERQLLQV
DGKVKGRRGQ PSIKLSINKK GAYGLGINVD RDHISAALLD FSGECVLLLE RIVSFPTENL
AKKIAQDLIE EVKTTLGEDW SKVQGIGLAR PDYMDSWLET LVTDSDQRAD LSNLKAALAY
WQSDAFESWL TDLTGVPCFC ENDAVAAATS ELLLASVAPQ RDFFYLFVST ACGGSFVANG
ECYFGAHGKA GSFGLIPTAT GKHGKWILEA LSLSSLRRFF ADKQIPWPST DDLWLEPQYT
TLIEQWASEV AFEVTPALAS VVALYDPEAI LIGGRLPSPV LAALIICIEN RLTAHSMLPL
PVIRIAQTGH TAGVLGAAVL PLYGSFAPQQ NLLLLSSKSA VSAS
|
|---|
| |