Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1724 |
Symbol | clpX |
ID | 5368332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 1945690 |
End bp | 1946970 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640804066 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_001340585 |
Protein GI | 152995750 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.010512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0300311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGATG ATAATTTTAG CCGTGGCGAC CACTCCGATC GGTTATTGTA TTGCTCTTTT TGCGGAAAGA GCCAAGACGA AGTAAAAAAA CTTATTGCAG GGCCTTCTGT CTATATTTGT AATGAGTGTG TAGATCTATG CAATAACATC ATCACACAGG AGCTATCACA AATTTCTGAG GATGGTGAAA GCTCTGATGA ATTGCCAACA CCTGCAAAAT TGAGTGCGGC GCTGGACGAT TATGTTATTG GTCAAGATAA AGCTAAACGC GTTTTAGCTG TGGCGGTTTA TAACCACTAC AAGCGTTTGC GTCATCAGGG TAAAACAGAT ACTAGCATTG AATTAGGTAA GAGTAATATC TTGCTAATTG GTCCAACGGG TAGTGGTAAA ACGCTTCTTG CCCAGACTCT TGCTCGTGTA TTAGATGTGC CGTTTACTAT CGCTGATGCG ACTACATTGA CAGAAGCTGG ATATGTTGGT GAAGATGTTG AAAACATCAT TCAAAAGCTA TTGCAGAACT GTGATTACGA TGTAGAAAAA GCACAGCGTG GTATTGTTTA TATAGATGAA ATAGACAAAA TATCTAGAAA GTCTGATAAC CCATCTATTA CACGTGATGT GTCGGGTGAA GGTGTTCAGC AGGCTTTGCT AAAACTCATT GAAGGTACTG TAGCTTCTGT TCCACCGCAA GGTGGTCGTA AGCACCCTCA ACAAGAATTT TTGCAAGTAG ATACATCCAA TATTCTGTTT ATTTGTGGTG GTGCGTTCGC AGGTTTAGAG CGTGTTATTA GTGATAGAAC AGAAAAAAGT AGTATTGGTT TTTCTGCAAC TGTGAAAAGT AAAGAAGAGG GAAGGTCTTT TTCTGAAGCT GTTCACCGTG TAGAGACAGA AGATTTAGTT AAATTCGGTT TGATTCCAGA GTTTGTTGGT CGTTTGCCTG TTGTGGCAAC CCTTTCAGAA TTGGATGAAG AGGCGTTGAT GACAATCTTA AGTCAGCCAA AAAATGCTTT GGTTAAGCAG TATCAGCATT TGTTTGAGTT AGAGGGTGTT GAGTTGGAAT TTACACCTGA GTCTTTGCGT GAAGCGGCTA AGTTGGCCCT AGAGCGTAAA ACTGGTGCTC GAGGCTTACG CAGCATCCTA GAGTCAGCTT TATTAGACTG TATGTATGAG CTTCCTACTC GTAATGATGT GGTGAAAGTT GTTATGGATG CCACTTCAAT TCGCGGAGAG ACTGCGCCTT TGATGGTGTT GGAAAAAGAA GAGTTGGCTA AAAACGCATA A
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Protein sequence | MSDDNFSRGD HSDRLLYCSF CGKSQDEVKK LIAGPSVYIC NECVDLCNNI ITQELSQISE DGESSDELPT PAKLSAALDD YVIGQDKAKR VLAVAVYNHY KRLRHQGKTD TSIELGKSNI LLIGPTGSGK TLLAQTLARV LDVPFTIADA TTLTEAGYVG EDVENIIQKL LQNCDYDVEK AQRGIVYIDE IDKISRKSDN PSITRDVSGE GVQQALLKLI EGTVASVPPQ GGRKHPQQEF LQVDTSNILF ICGGAFAGLE RVISDRTEKS SIGFSATVKS KEEGRSFSEA VHRVETEDLV KFGLIPEFVG RLPVVATLSE LDEEALMTIL SQPKNALVKQ YQHLFELEGV ELEFTPESLR EAAKLALERK TGARGLRSIL ESALLDCMYE LPTRNDVVKV VMDATSIRGE TAPLMVLEKE ELAKNA
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