Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1705 |
Symbol | |
ID | 5369087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 1924321 |
End bp | 1925034 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640804046 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_001340566 |
Protein GI | 152995731 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.193811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.445635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACAGG TAGTGCTTGA TACAGAAACG ACAGGTATTG ATCCAAAACA AGGGCATCGA ATTATCGAAA TCGGTTGTGT GGAAATGATT GGTCGTAAGC TGACTAATCG ACATTTTCAC GTTTACATCA ATCCCGATAG AGAAGTGGAA GAGGAAGCCT TTCGTGTTCA CGGGATCAGT AACGAATTTC TGGCTGACAA ACCACGTTTT CATGAAATAG CCCAAGAGTT TTTCGATTTT ATAAAAGGCG CCGAACTAAT TATTCACAAC GCGCCTTTTG ATATTGGCTT TATGGATCAT GAGTTTGCCC GTATTGGCGG TTATCCGAAA ACGGCAGAGG TTTGTGGTGT TTTTGATAGT TTGGTTTATG CCCGTAAAAA GCATCCAGGG CAGAAGAATA ACCTAGATAT TTTGTGTAGA CGTTATGGTA TTGATAACTC ACACCGTGAA TTGCACGGCG CTCTTTTAGA CTCAGAAATT CTTGCTGACG TTTATTTGTT GATGACGGGT GGGCAGACCA GTCTTGGGCT AGCAAGTAGT TCTGAATCGG AGTCAAAAGA GGAGGGTGGT GTAGAGGAGA TTCGTCGCTT TTCAGCTGAT CGTCCGGCGC TGAAAGTTAT TAGAGCTAGC AGTGAAGAGT TAAAGCTACA TGAAGAACGA TTGGATTTGA TTGATAAAAA ATCAGGTCAG TCTTTGTGGC GGATTAAGCA TTAG
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Protein sequence | MRQVVLDTET TGIDPKQGHR IIEIGCVEMI GRKLTNRHFH VYINPDREVE EEAFRVHGIS NEFLADKPRF HEIAQEFFDF IKGAELIIHN APFDIGFMDH EFARIGGYPK TAEVCGVFDS LVYARKKHPG QKNNLDILCR RYGIDNSHRE LHGALLDSEI LADVYLLMTG GQTSLGLASS SESESKEEGG VEEIRRFSAD RPALKVIRAS SEELKLHEER LDLIDKKSGQ SLWRIKH
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