| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1682 |
|---|
| Symbol | |
|---|
| ID | 5365776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 1900593 |
|---|
| End bp | 1901603 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640804023 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001340543 |
|---|
| Protein GI | 152995708 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCC CTCTTATTCA AATTAGCGGC TTAGAAAAAG CGTTTACGTC AAATGAAAGT
TGGCTTAGCC AATGGCGATT CCGTCACGGC AAACTTACAA GACATAAAGA CAGCATTCAT
GCGCTCAATG GCGTTAACCT TACAATAAAC CAAGGCGAGA CCTTGTGTGT TGTGGGTGAA
ACTGGCTGTG GAAAATCCAC CCTAGCACGC GCCATTATGG GACTTACAAC ACCAAGTGCG
GGTGAAATAC ATTACCTTGA TCAACGTATC GATCAATTAA ATAACCGTCA GCGCATGTTT
TTCCGACGTC GTATGCAAAT GGTTTTCCAA AACCCTTATG CGTCTCTAAA TCCTCGAATG
ACGGTATATC AAACATTAAG TGAGCCAATT TCCTTCCATA ATCCACAGTT TTCACAATCT
CAAGTGGATG AGAAAATTGA TGAACTTTTA GAGTCTGTCG GCATTTCTGC TTCGAGTTCA
GATCGTTACC CTCATGAATT CTCAGGTGGT CAACGTCAAC GAATCAGCTT AGCTCGCGCC
CTGTCGGTTG AACCCGACTT TATTGTCGCT GATGAGCCAT TATCTGCATT AGATGTATCA
GTACAAGCAC AAGTACTGAA CCTAATGATG GACAAACAAG AAGAACGCAA CCTTAGCTAT
CTTTTCATTA CTCATGACTT AGCGGTTGTC GAACATTTTG CTACCAGAGT AGCGGTAATG
TATTTGGGAC GAATCTGTGA GCTTGCGCCT ACAGGAACAT TATTTAGCGC CCCAAAACAT
CCTTATACTC AAGCCTTATT ATCCGCTATC CCAAGACTAG ACAGTAATAC CGCGCAACCA
ATTCGATTAA TAGGTGAAGT CCCAACACCA ACAGAAAAAC CAATTGGCTG TGTTTTTCAG
GCACGCTGCC CTTATGCAAA TCAGCGCTGC TATGAAGCGT CTCCTGCCAT GACACTACAA
AGTGATGGCA GTAGTGTGGC CTGTCACGCT ATTGAGGAGG GCCGACTATG A
|
|---|
| Protein sequence | MATPLIQISG LEKAFTSNES WLSQWRFRHG KLTRHKDSIH ALNGVNLTIN QGETLCVVGE
TGCGKSTLAR AIMGLTTPSA GEIHYLDQRI DQLNNRQRMF FRRRMQMVFQ NPYASLNPRM
TVYQTLSEPI SFHNPQFSQS QVDEKIDELL ESVGISASSS DRYPHEFSGG QRQRISLARA
LSVEPDFIVA DEPLSALDVS VQAQVLNLMM DKQEERNLSY LFITHDLAVV EHFATRVAVM
YLGRICELAP TGTLFSAPKH PYTQALLSAI PRLDSNTAQP IRLIGEVPTP TEKPIGCVFQ
ARCPYANQRC YEASPAMTLQ SDGSSVACHA IEEGRL
|
|---|
| |