| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1658 |
|---|
| Symbol | |
|---|
| ID | 5365326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1865129 |
|---|
| End bp | 1866046 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640803999 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001340519 |
|---|
| Protein GI | 152995684 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.265046 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACAA ATGAACTGAT TGCTTTGTTG CCTGATATGG CGGCTTTTGT TGCCGTTGTT
GAAACTGGAA GTTTTACTAA AGCGGCCCAA AAGCTGGGCG TGACACCGTC TGGCGTTAGT
CGGCAAGTTT CAAGAATAGA GACCGCTTTG TCGGCGGTAT TAATAGAACG TACGACACGT
CGTCAAACCA CGACTTTGGT AGGCAGAGCG GTATACGAGC AATGTCGGCA AATGCTAGAC
AGTGCAAAAG AAGCCGTTAT TGCCTCAGAA AATAATGCCA ACGAGGCTTC CGGTCGTCTG
CGTATCGCCG CGCCGGATTC ATTTGCCAGA CAGGTTTTAG AGCCTTTGCT TGTGTCTTTT
ATGCAGCGGT ATCCAGCGGT TTCTTTGCAA GTGCTAGTGA CAGACTTGCG AGTGGATCCA
GCCTATCAGA ATGTTGACTT AGTTTTTTAT ATCGCCGAGA AGCCGTACGA GCATTTGGTC
TGCAAAACAT TAGGCCGTGT TCGCTCTGTT TTGTGCGCTA GTCCTCAATA CTTGGCAGAT
CATGGTGTAC CAAACTCTCC AGAAGATTTG ACCGATCACT CCTGTTTACC ACTTGGATTA
TTTGATGGTG ATTCTATCTG GACCTTTAGC CAAGGGGAAC GGAGGACGGT CGTTACTGTG
GATGGTCGTT ACATGATGAC TGATGCTGAA ATGCGTTTAA AAGGCGTGAT GAATGGCTTT
GGTATTGCAC CTTTTCCTGA TTTTGTCGTC AAAGATGCTT TAGAAAAAGG GGAGGTGGTG
CAAGTACTAG AAGACTGGCA GTTAAACAGT GATTTCCAAG GTGGAATATA CATGCAGTTT
CCTGCAATGC GTTTTATGCC GAATAGACTG AGAGTCTTCA TTGATTTTAT GGAAAGTCAT
TGGGCTAAGA CTGTTTAA
|
|---|
| Protein sequence | MDTNELIALL PDMAAFVAVV ETGSFTKAAQ KLGVTPSGVS RQVSRIETAL SAVLIERTTR
RQTTTLVGRA VYEQCRQMLD SAKEAVIASE NNANEASGRL RIAAPDSFAR QVLEPLLVSF
MQRYPAVSLQ VLVTDLRVDP AYQNVDLVFY IAEKPYEHLV CKTLGRVRSV LCASPQYLAD
HGVPNSPEDL TDHSCLPLGL FDGDSIWTFS QGERRTVVTV DGRYMMTDAE MRLKGVMNGF
GIAPFPDFVV KDALEKGEVV QVLEDWQLNS DFQGGIYMQF PAMRFMPNRL RVFIDFMESH
WAKTV
|
|---|
| |