Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1557 |
Symbol | |
ID | 5367020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 1740779 |
End bp | 1741657 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640803900 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_001340420 |
Protein GI | 152995585 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.24573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000000880766 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAAACA ATGAGCTAGC CATTAGCCTT GCCGATGTAA TGGAGCTGAT GCTCGATTCT GTTTGTGTTG TTGATCGCAA TGGAAGTTTC GTTTTTGTTA GTGCGGCTTT TGAGGATATG TTTGGTTATG CGCCCCATGA AGTGATTGGC AAGCCTATGG TAAATATGGT TTATCCGGAT GATAGGGAGA AAACGCTAGG TATCGCTGAG TCAGTTGTTA GTGGTCAGAT TCTGCCGCGC TTCGAGAACC GTTGGGTGCG TAAAGATGGC AAGGTGGTAA ATGTGCTGTG GTCGGCTAGG TGGTCGGAAG AGCACCAGGT GCGAATCGCA GTTGCTCATG ATATTACCGA GCGCAAGGAA ATGGAGGCTC AGCTGCTTTA CGCTGCGGGT CATGATGATT TGACGGATTT ACCGAATCGT ACTTTGTTGT TAGACCGTTT GCAGGCGTCG CTAACATTGG CGGAGCGTGA GCAAGTCGGT TTATCGGTTT TGTTTATTGA TATTGATGGT TTTAAAGATA TTAATGATGG CTATGGCCAT GCAGTAGGTG ATTTATTGTT ACAACTAATA GCTAAAAGGC TAGGTGGTTG TGTTCGTAAG TCTGACACGG TTGGACGTCT GGGCGGCGAT GAGTTTTTAA TTATTTTAAA TAAAGTGAAT AATGCGGAAA GTGCGGCCTT GGTCGCTGAA AAAATCCGTG CTGCTTTGTC TGAAGTTTTT GTTGTTGAAG GCTCTACATT GTCTGTTTCT GCCAGCATTG GTATTGCTAG TTACCCTGAA AACGGTAAAG AGCCATTGGA TTTGGTGCAG TCTGCTGATC ATGCTATGTA TCAAGCAAAA AATAATGGTG GCGATAAAGT TATTTTGGCG GCTTCTTAG
|
Protein sequence | MKNNELAISL ADVMELMLDS VCVVDRNGSF VFVSAAFEDM FGYAPHEVIG KPMVNMVYPD DREKTLGIAE SVVSGQILPR FENRWVRKDG KVVNVLWSAR WSEEHQVRIA VAHDITERKE MEAQLLYAAG HDDLTDLPNR TLLLDRLQAS LTLAEREQVG LSVLFIDIDG FKDINDGYGH AVGDLLLQLI AKRLGGCVRK SDTVGRLGGD EFLIILNKVN NAESAALVAE KIRAALSEVF VVEGSTLSVS ASIGIASYPE NGKEPLDLVQ SADHAMYQAK NNGGDKVILA AS
|
| |