Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1549 |
Symbol | |
ID | 5367014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1733734 |
End bp | 1734543 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640803892 |
Product | integrase catalytic region |
Protein accession | YP_001340412 |
Protein GI | 152995577 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.134609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000192905 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGTTTGGCG TTCCAGGCAG TAGTTACTAC GATTACCTCA AGCGTAAGCA GAAGATTGAT GTTGAACGGT TAACACTGCG TAGTCTAGTG GTTCAGCATT TCAATGAGAG CCGTGGTGCG GCGGGAAGCC GAACATTACA GAATATGTTG CAGGATGAAG GCTATACACT GGGTCGCTTC AAAGTCAGAA ACTTAATGAA GGAAGCTCGC TTATGCAGTA AACAACCAGG AAGGCATCGC TATAAGGATA CAGGAGGCGA ACAACCAGAT ATCCCTAATC ATCTGAGTCG AGAGTTCAAT GTGAGTGCCC CTAATCAAGT TTGGTGTGGC GATATTACTT ATATCTGGGC AGAAGGTCGC TGGCACTACT TAGCTGTCAT TTTGGATTTA TATCGAAGGC GTATGATTGG CTGGGCGTTC TCATCAAATC CCAATGCAGA GCTTGTTATA AAAGCTTTAG ATATGGGTTA TGAACAGCGT GGTCGACCAA AAGGTGTGAT GTTCCATTCG GATCAAGGAA GCCAATACGC GAGTCGAAAA TTTAGACAAC GGCTATGGCG TTATCGCATG AAGCAAAGTA TGAGCCGCCG AGGAAATTGC TGGGACAATG CTCCCATGGA GAGAGTGTTT AGAAGTTTGA AATCCGAGTG GGTTCCAAAG GCAGGATACA TGACTCAAAA CGAAGCAAAA CGAGATATCA GTTTTTATCT GATGGATTAT TATAACTGGC GCAGGCCGCA TCAATATAAC AACGGGATGC CACCTGCCAA AGCGGAAGAA CAACCTAATT TACTGTCCGG AATTAGTTGA
|
Protein sequence | MFGVPGSSYY DYLKRKQKID VERLTLRSLV VQHFNESRGA AGSRTLQNML QDEGYTLGRF KVRNLMKEAR LCSKQPGRHR YKDTGGEQPD IPNHLSREFN VSAPNQVWCG DITYIWAEGR WHYLAVILDL YRRRMIGWAF SSNPNAELVI KALDMGYEQR GRPKGVMFHS DQGSQYASRK FRQRLWRYRM KQSMSRRGNC WDNAPMERVF RSLKSEWVPK AGYMTQNEAK RDISFYLMDY YNWRRPHQYN NGMPPAKAEE QPNLLSGIS
|
| |