| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1542 |
|---|
| Symbol | |
|---|
| ID | 5367500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 1723676 |
|---|
| End bp | 1724734 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640803885 |
|---|
| Product | electron transport complex, RnfABCDGE type, D subunit |
|---|
| Protein accession | YP_001340405 |
|---|
| Protein GI | 152995570 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
|---|
| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.142338 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAT TGAGGATCAC CTCCCCCCAC ACACAACGTG CAGGACGTCG CACCTCTTGG
GTAATGCAGA TGGTTATTTT AGCGACCATT CCTGGCATTG TGGTACAAAC TTGGCTATTT
GGCTGGGGCA CGTTAATTAA TTTAATGATT GCCTGCATCA CCGCACTATT GAGTGAAGCG
GCCATTTTGG CGATGCGTCG TCGCCCTGTT AGCTTTTTCC TAAAAGATTA CAGTGCGTTA
TTAACCGCCG TGTTATTAGG TGTGGCTCTG CCGCCGATTG TGCCTTGGTG GGTAACCGTG
ACAGCGGTTG CTTTTGCCAT CATCTTTGCC AAGCAACTGT ACGGCGGCTT GGGTAATAAT
CCATTCAACC CGGCTATGGT TGGTTACGCC ATTGTGCTGG TGTCTTTTCC CGTACCAATG
AGCCAATGGC TTGGTGTACA AAGCATGGTA GCGTCAGGGG ATACTCTGTC TATGATGCAA
AGCTTACAAG CTATATTCCA TCACTTACCC GTGATCGATA GCTACACTAT GGCAACGCCG
TTGGATGGCT TCAAACACAA AGACCTACTA GATTCGCAAG CCGCCTTTAG CAGCATTGCT
GCACTTCAAG GGCCAAGTTT AAACAGCTGG ATTTGGGTAA ATGCAGCTTA TCTTGTAGGT
GGTCTTGGGC TTATCTGGCT ACGTATTATC ACCTGGCACA CGCCAGCAGC ACTATTAGGT
GCTTTAATGG TAATGGCGGG TGTATTTCAC CTATTTGATC CGAGCAACAC AGCAACGCCA
TTTTTCCACC TCACTACTGG CGCTGCGATG TTTGGGGCTT TCTTTATCGC CACAGACCCT
GTGTCGTCTT GCACCAGTAA TCGCGGTAAA CTGATTTATG GAGCAGGCAT TGGTATCTTG
ATTTACATTA TTCGCTCTTG GGGTGGTTAT CCTGATGGGG TGGCATTTGG CGTCTTGTTA
ATGAACTTCG CTGCGCCTTT AATCGACTAC TACACACAGC CAAGAACCTA CGGTCATAAA
AAAGCCAAAA CCGGTTTAAA AGTTGGGGAG GATAACTAA
|
|---|
| Protein sequence | MALLRITSPH TQRAGRRTSW VMQMVILATI PGIVVQTWLF GWGTLINLMI ACITALLSEA
AILAMRRRPV SFFLKDYSAL LTAVLLGVAL PPIVPWWVTV TAVAFAIIFA KQLYGGLGNN
PFNPAMVGYA IVLVSFPVPM SQWLGVQSMV ASGDTLSMMQ SLQAIFHHLP VIDSYTMATP
LDGFKHKDLL DSQAAFSSIA ALQGPSLNSW IWVNAAYLVG GLGLIWLRII TWHTPAALLG
ALMVMAGVFH LFDPSNTATP FFHLTTGAAM FGAFFIATDP VSSCTSNRGK LIYGAGIGIL
IYIIRSWGGY PDGVAFGVLL MNFAAPLIDY YTQPRTYGHK KAKTGLKVGE DN
|
|---|
| |