| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1424 |
|---|
| Symbol | |
|---|
| ID | 5366022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 1593348 |
|---|
| End bp | 1596806 |
|---|
| Gene Length | 3459 bp |
|---|
| Protein Length | 1152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640803768 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001340288 |
|---|
| Protein GI | 152995453 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.68675 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTTT TCTGGATTCT GTTAGCCATT CTGTATGTTC TCGGTCTATT CTGGATCGCC
ATTTGGGGCG ACAAAGAAAG TCCAACAGCA AAAAAACTGA CTCGTCATCC GCTCGTCTAC
AGCTTATCTC TGGCTATATA TTGTACAGCT TGGACGTTTT ACGGTTCGAT TGGTGAGGCT
TCTCGATCAG GCTGGAGTTA TTTACCTATT CTTCTTGGTC CAATTTTACT GTATTTATTT
GCCTTTCCTG TACTCAGAAA AATGATTACG GTCAGCCGTA AACAAAATAT TACTTCTATT
GCTGACTTTA TCTCTTCTCG ATATGGCAAA CGCCCAATGA CTGCACCTTT GGTCATACTG
ATTAGTATGC TCGCGGTGAT TCCTTACATT GCCTTACAGC TAAAAGCCAT CGGCTCGAAC
TTTGCACTTT TTGTCAATCA GGATGAGTCT TCAACCAGTC TTGTTGTCTT AGTGGCGACT
ATTTTAATTG GTATTTTCGC CATGCTATTT GGCACTCGAA AAGTCGAAGT TACTGAATAT
CGTTCAGGTA TGATGCTAGC AATTGGGGCT GAATCCTTAT TTAAACTGAT TTCCATTGTC
GCAGTAGGTA TTGTTGCGGT TCTTATGACT CAAGAGTTTG ATATAAACAA ACTCAGCAAA
AATGTCGATT TCACGGTATG GAACTCAGAG CAGTTTTTAT CCTTCACATT TCTAATGCAA
ACCTTCATGT CGGCAGCGGC GGTGATTTGC TTGCCTCGCC AGTTCCATGT CACCGTGGTT
GACCATCAAA ATAATCGTCA ATCCAAAATG GCGCGTTGGT TATTCCCTTT ATATTTACTG
ATTTTTGCAG TCCTCATCCC ACCAATAGCC ATTGCAGGTC AAAATCTTTT CTCTGCTGAT
ATAAACCCTG ATACCTATGT CATTCAGTTC GCTTTAACGT CTGACAGCCT TCCCTTACAA
ATGTTAATTT TCCTAGGTGG AATGTCGGCT ACTACCGCGA TGATTATCAT CGCTACTTTT
GCCCTAAGCA TCATGATCAG TAACGACGTA ATCTTACCTC TGATGTTGGC GCGAGCCAGC
GCGCAGCAAC AAGCCTTACC TCTATATCGT CGTCGAATAT TGCTGATTCG CCGCTTAGCC
ATGATGGGGA TATTGCTGTT ATCGTTTTTG TATTATCAAA AAATGGCCAA TGCTGAGTCA
TTAGCAAACA CAGGCATATT GGCTTTCTCT CTCGTGTTAC AGCTTATGCC TGCGGTACTA
GGTGGTCTTT ATTGGAAACG CGCCCATGCC CACGGAGTTT ATACCGGCTT AACCTTCGGT
TTTTTGTGTT GGGTATTACT CATGATGCTG CCTCTAACAG GCAATATGGA TTGGGACTTA
GAGAGTGCCC AATCGCGCTC AGAACTTATT AGCTACGGCG CTTTTATCAG CTTACTAGCG
AATATTTTTG GCTATGTGGT CGGCTCTTTA TTATCCACCG AGCGCTTAAT TGACCGAATC
CAAGCCACCG CCTTTGTTAG CCCAACCACA GAGCTGGAAA AAGGCTTTTT CAAACCCAAG
AGCAAGGCCA CTAATGGCGA TTTTTTTGTT TTGCTGGAAA CTTTTTTGGG TAAACAAAAG
AGCCAGCAAG TTCTGTCGAA TTTTGAACAA GATTACAGCC AAACCATCCC ACCAAATGCA
TCTCCAAATC GTTTATTTGT TGACTACTGT GAACGCATTT TAGGTGGTGT ATTAGGCGGT
TCTTCGGCTC GTACCATCAT TAATTCCATC TTGATTGATA AACAAATCAA GGTAGAAGAA
ATGGTAACTT ACTTAGATGA AACCACCCAA GCCATCCAGT TCAGCCAAAA CTTACTTTTC
GTTTCCATGG ATAATCTAGA CCAAGGCATT AGTGTGGTCG ATAAAGACCT GCGCATTGTG
GCTTGGAACA AAACTTACCT GTCTCTTTAT CCTTATCCAG AAGGCATGTT AACTGTTGGG
TTGCCTGTGG AAGAGCTAAT CCGCTTTAAT GCTGAACGCG GAGAGTGTGG CGTAGGTGAC
ATAGAAGAAC TGGTTAACAA GCGTTTAGAG CATCTTAAAA AAGGTAGCAC GCACCGATTC
TTACGTCGTC GAGCAAGTGG TCGTGTCATC GAAATGGTGG GTAATCCTCT ACCTGACGGA
GGCTTTGTAA CCAGCTTTAC AGATGTTACA GAGCACATAG AGAGCCAGCA GGCCTTAAAA
GAAGCCAACA TAGACTTAGA AAAGCGTGTC GAAGCTCGTA CGGTAGAAGT GCAAGGCGTT
AACCACGAAC TCATGCAAGA GATAGAACGA CGAAATCAGG CTGAAAAAGC CCTGATCAGC
GCCAAAGCAG AAGCCGAGCA AGCCAATGCG TCAAAGACAG AATTCCTCGC CTTAGCCAGC
CATGACATTT TACAGCCATT AAACGCCGCC AAGCTCTATA TGGGGATTTT GCAATCCACA
GAGCTGCCAG ACAACACCAA CCAAGTCATT GAAAAATTAT CCGATTCATT AGAATCAACC
GAAGCACTTA TCTCAACCCT ACTTGAGATC GCCCGCCTAG ACCAAGGTGC CATTCAACCC
AAGTTAGTGG ATTGTAACCT GCAAGATATT CTCGCGCCTA TTGTTGCTGA ATTTGGTGTT
ATCGCAGACA GTAAAAACAT CCGTTTAACC ACACATTTAA GGCCTTTTAG GGTTCATACA
GATCCTATTT ACTTACGCCG AATCATTCAA AATTTTGTCT CTAACGCGGT GAAGTACACG
CAAAAAGGAC GCGTATTAAT AAGCGTAAGA CCACGTGCTG GCGTCGTGTA TTTACAAGTA
TGGGACACGG GTGTTGGCAT ACCAGCCACC GAGCAAAAGA AAATATTTGA TGATTTCTAT
CGCTGGGAAA ATACCCAAGA GCCCGGCATG GGATTAGGAC TAGGGTTAGT TCGTCGGATG
CAGAAACAAC TAGGCTTAGG TACCGAAATA CATTCTATAC CTGGCAAAGG TAGCTGTTTT
AGCATCGGTA TTCCTTTGGC TCAAAGTGAT CACATTATTG ATTTCTCAAC TTCCCAAGTC
ACAATTACAC CGCAAGAAAA ACTGGCTCAT TGCTATGTTT GGTGTATTGA CGACGATAAA
AATAACCTCA ATGCCATGAA TACTCTATTA ACTCATTGGC AATGTGACTG TCGAACCTTT
AACCGCTTTA ATGATGCCTT AGAGGCAGAA GGAGAAGCAG AGTTACTATT AGTGGATTAT
CATCTTGATG GGGATAAAGA TGGCTTATCT TTGATTAAAG CACTTCGAGC TCGTGCTGGA
AAAAACATTC CAGCTGTATT GATCACCGCC CTACGCGATC CTGAATTAGT TGAGCAATGT
AAGCAACAGA ACATTACCTA CATGGCGAAA CCTGCAAAGC CCGCAAAATT ACGAGCTTTG
GTTCAACATA TTCATCAATT GAGAGAAGAC GCGAAATAG
|
|---|
| Protein sequence | MTVFWILLAI LYVLGLFWIA IWGDKESPTA KKLTRHPLVY SLSLAIYCTA WTFYGSIGEA
SRSGWSYLPI LLGPILLYLF AFPVLRKMIT VSRKQNITSI ADFISSRYGK RPMTAPLVIL
ISMLAVIPYI ALQLKAIGSN FALFVNQDES STSLVVLVAT ILIGIFAMLF GTRKVEVTEY
RSGMMLAIGA ESLFKLISIV AVGIVAVLMT QEFDINKLSK NVDFTVWNSE QFLSFTFLMQ
TFMSAAAVIC LPRQFHVTVV DHQNNRQSKM ARWLFPLYLL IFAVLIPPIA IAGQNLFSAD
INPDTYVIQF ALTSDSLPLQ MLIFLGGMSA TTAMIIIATF ALSIMISNDV ILPLMLARAS
AQQQALPLYR RRILLIRRLA MMGILLLSFL YYQKMANAES LANTGILAFS LVLQLMPAVL
GGLYWKRAHA HGVYTGLTFG FLCWVLLMML PLTGNMDWDL ESAQSRSELI SYGAFISLLA
NIFGYVVGSL LSTERLIDRI QATAFVSPTT ELEKGFFKPK SKATNGDFFV LLETFLGKQK
SQQVLSNFEQ DYSQTIPPNA SPNRLFVDYC ERILGGVLGG SSARTIINSI LIDKQIKVEE
MVTYLDETTQ AIQFSQNLLF VSMDNLDQGI SVVDKDLRIV AWNKTYLSLY PYPEGMLTVG
LPVEELIRFN AERGECGVGD IEELVNKRLE HLKKGSTHRF LRRRASGRVI EMVGNPLPDG
GFVTSFTDVT EHIESQQALK EANIDLEKRV EARTVEVQGV NHELMQEIER RNQAEKALIS
AKAEAEQANA SKTEFLALAS HDILQPLNAA KLYMGILQST ELPDNTNQVI EKLSDSLEST
EALISTLLEI ARLDQGAIQP KLVDCNLQDI LAPIVAEFGV IADSKNIRLT THLRPFRVHT
DPIYLRRIIQ NFVSNAVKYT QKGRVLISVR PRAGVVYLQV WDTGVGIPAT EQKKIFDDFY
RWENTQEPGM GLGLGLVRRM QKQLGLGTEI HSIPGKGSCF SIGIPLAQSD HIIDFSTSQV
TITPQEKLAH CYVWCIDDDK NNLNAMNTLL THWQCDCRTF NRFNDALEAE GEAELLLVDY
HLDGDKDGLS LIKALRARAG KNIPAVLITA LRDPELVEQC KQQNITYMAK PAKPAKLRAL
VQHIHQLRED AK
|
|---|
| |